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The map label for this gene is ypbQ

Identifier: 16079262

GI number: 16079262

Start: 2316446

End: 2316952

Strand: Reverse

Name: ypbQ

Synonym: BSU22040

Alternate gene names: 16079262

Gene position: 2316952-2316446 (Counterclockwise)

Preceding gene: 16079263

Following gene: 16079261

Centisome position: 54.96

GC content: 42.6

Gene sequence:

>507_bases
ATGTTTTGGTTGTTGATCGCCATTCTCATTGTTCAAAGAGCAGCAGAAATGGCAGTGGCCAGGCAAAACGAACAAAAGGT
AAAGAAGCAAGGAGCAATTGAATTTGGCGAGAGCCACTATCCGTATATCATTACGATGCATATCCTTTTTTTCCTGTCCT
TAATTGCCGAGGTGCTGCTGATGAATAAACAGCCGTCCAGCTGGTGGCTCGGTATCGCTGCAGTGATTTTAAGCGTACAG
ATCGTACGGTATTGGGCGCTTTGTTCCTTAGGAGCATATTGGAATACGAAAATCCTTGTTGTTCCAGGTGTAGAGCTTGT
AAAAAAAGGTCCATATAAATGGATGAAACATCCAAACTATGCCGTTGTTATCCTCGAAATTTTGCTGATTCCGCTGCTTT
ATCAAGCATACGTCACCATGTGTCTGTTTTCCATTTTCAATGCCGTGTTGTTAAGCGTCAGAATTCGCGCAGAAGACAAA
GCATTACAGGAATACAGCGTAAAATAG

Upstream 100 bases:

>100_bases
CGGACATAAAAAGGAAGCTGAACGAGGACTGATTGGCGCATTAGGGCCGGGTTTCTCATCAGAGTTGCTATTATTCAGCT
GGGAAAAGGGGGCCTGACTC

Downstream 100 bases:

>100_bases
CGATTGAAAATCATTCTCAACCATGTTAAAATGGGTTTGAAAAAGATTCTCAATCAGGATGGTGAAGCAAATGACAATGC
TGTTTTTGCTTGGAGCGGTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILFFLSLIAEVLLMNKQPSSWWLGIAAVILSVQ
IVRYWALCSLGAYWNTKILVVPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAVLLSVRIRAEDK
ALQEYSVK

Sequences:

>Translated_168_residues
MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILFFLSLIAEVLLMNKQPSSWWLGIAAVILSVQ
IVRYWALCSLGAYWNTKILVVPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAVLLSVRIRAEDK
ALQEYSVK
>Mature_168_residues
MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILFFLSLIAEVLLMNKQPSSWWLGIAAVILSVQ
IVRYWALCSLGAYWNTKILVVPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAVLLSVRIRAEDK
ALQEYSVK

Specific function: Unknown

COG id: COG1755

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPBQ_BACSU (P54158)

Other databases:

- EMBL:   L77246
- EMBL:   AL009126
- EMBL:   L19548
- EMBL:   Z22929
- PIR:   D69933
- RefSeq:   NP_390086.1
- ProteinModelPortal:   P54158
- EnsemblBacteria:   EBBACT00000000265
- GeneID:   939072
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22040
- NMPDR:   fig|224308.1.peg.2209
- GenoList:   BSU22040
- GeneTree:   EBGT00050000001552
- HOGENOM:   HBG441438
- OMA:   PNYFLNV
- ProtClustDB:   CLSK887477
- BioCyc:   BSUB:BSU22040-MONOMER
- InterPro:   IPR007269

Pfam domain/function: PF04140 ICMT

EC number: NA

Molecular weight: Translated: 19317; Mature: 19317

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfdf2f20)-; HASH(0xfac418c)-; HASH(0x106a082c)-; HASH(0xfa2183c)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILFFLSLIAEVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MNKQPSSWWLGIAAVILSVQIVRYWALCSLGAYWNTKILVVPGVELVKKGPYKWMKHPNY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCHHHHHCCCHHHHCCCCH
AVVILEILLIPLLYQAYVTMCLFSIFNAVLLSVRIRAEDKALQEYSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILFFLSLIAEVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MNKQPSSWWLGIAAVILSVQIVRYWALCSLGAYWNTKILVVPGVELVKKGPYKWMKHPNY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEECCHHHHHCCCHHHHCCCCH
AVVILEILLIPLLYQAYVTMCLFSIFNAVLLSVRIRAEDKALQEYSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 8396117