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The map label for this gene is yomR

Identifier: 16079184

GI number: 16079184

Start: 2242414

End: 2243631

Strand: Direct

Name: yomR

Synonym: BSU21250

Alternate gene names: 16079184

Gene position: 2242414-2243631 (Clockwise)

Preceding gene: 16079183

Following gene: 16079185

Centisome position: 53.19

GC content: 37.19

Gene sequence:

>1218_bases
ATGAGCAGCAGTAAATACGTCGGTCAACTCAAACAAAACAATATTCAGATCAATTCATTAAGAGGATCCAATGACAGAGC
TGAAAAACATATGCTTGAGCATGAACAAGCATTAACAGAAAAAACAAATTTGTTTATGGAATATCAACAGAATGAGCTCA
AGAAACATACTGATGATAAGTCTAATCCTCATTTAGTCACCAAAGAGCAGGTTGGTTTGGGCAATGTTTTAAATAATGTC
CAAGCAACTAAAGAGGAATTTGACGAACATCTAAACGATACTCTCAATCCCCATTCAGTAACTAAAAGCCAAGTTGGTTT
AGCAAATGTCCTGAATGAAAAACAAGCAACTAAAACTGAATTTGATCAACATGCTCAAGATACAATTATTCATATTACAG
CTTCAGAGAGAACTACTTGGAATGCCGCGGAAAGCAATTCTAAAAAGTATACTGACGCACATTCTCAGAACACAAACAAT
CCTCATAAAGTAACTGCAATTCAGGTCGGGTTAGGAAACCTTACGAATGATAAACAAGCGACAAAATTAGAATTTGATGC
TCACATAAAAGATAATGAGCGTCATATCACTAGCACTGAAAGAAGTAAATGGAATTCTGCTCAATTAACTAAAATATCAA
GCGATGATGGTCAACCACTAGTTTCTATAACAAGCGACTTTCATTCTGAACTTTTGAATTCTCCTACTTTAACATATTTC
GGATATGATAAGGCTGCCTTAGAAGCACCTCCAAGTAACGGGCGGGGATTTTGGACATGTAGTGCTGATAAACTTTATGG
TCAAGCTATTGTTCTGACTAATGATAATAAGACTTACAGAAAATCATTGATAAACGGAGCATGGTCAAGTTGGGAACGAT
TGATAAGTAGCAGTGAAATTGATAACGTGCCTTGGTTAAGCGTTACATATAAAAATGGCGCAAAGACAGGCTCAAGGCCA
CTTCAATATCGTAAAGTAGCTGGGACTTTGCAGCTTAGTGGGCACGTTGTAACAAACCGAGATGTAGTATTTGCTTCTAT
TCCAACTGAATTTTCTCCAACACAAGGTGCTGTTAAGTCTGTTGAAGTGAGTGGAACTTTCGGCAGAAGTAAATTATTTG
TAAACTCTAATGGTGACCTTCAGCTAAGTGGGGTATCAGCTGACAACAGTGCTGCAATAACGGGTTACTACATAGATGTA
GTTGTTCCGTTGAATTAG

Upstream 100 bases:

>100_bases
GAGTATTGGGACTTCGACATTGCTGGATTGTTTAAAGTTATGTTCGAAGTAGTTTCTGTTACTGGTGATGTAACTGTTAA
AGGGATTGTGGTGAGTTAAG

Downstream 100 bases:

>100_bases
GAGGTAAGTCGTGATACAAGTCTATAAATATGACGAAAATTTTATGTTCGTTGAACCCCTAGTTGTAACTGAAATCGATG
AAAAGGGAGATTATATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSSSKYVGQLKQNNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDKSNPHLVTKEQVGLGNVLNNV
QATKEEFDEHLNDTLNPHSVTKSQVGLANVLNEKQATKTEFDQHAQDTIIHITASERTTWNAAESNSKKYTDAHSQNTNN
PHKVTAIQVGLGNLTNDKQATKLEFDAHIKDNERHITSTERSKWNSAQLTKISSDDGQPLVSITSDFHSELLNSPTLTYF
GYDKAALEAPPSNGRGFWTCSADKLYGQAIVLTNDNKTYRKSLINGAWSSWERLISSSEIDNVPWLSVTYKNGAKTGSRP
LQYRKVAGTLQLSGHVVTNRDVVFASIPTEFSPTQGAVKSVEVSGTFGRSKLFVNSNGDLQLSGVSADNSAAITGYYIDV
VVPLN

Sequences:

>Translated_405_residues
MSSSKYVGQLKQNNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDKSNPHLVTKEQVGLGNVLNNV
QATKEEFDEHLNDTLNPHSVTKSQVGLANVLNEKQATKTEFDQHAQDTIIHITASERTTWNAAESNSKKYTDAHSQNTNN
PHKVTAIQVGLGNLTNDKQATKLEFDAHIKDNERHITSTERSKWNSAQLTKISSDDGQPLVSITSDFHSELLNSPTLTYF
GYDKAALEAPPSNGRGFWTCSADKLYGQAIVLTNDNKTYRKSLINGAWSSWERLISSSEIDNVPWLSVTYKNGAKTGSRP
LQYRKVAGTLQLSGHVVTNRDVVFASIPTEFSPTQGAVKSVEVSGTFGRSKLFVNSNGDLQLSGVSADNSAAITGYYIDV
VVPLN
>Mature_404_residues
SSSKYVGQLKQNNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDKSNPHLVTKEQVGLGNVLNNVQ
ATKEEFDEHLNDTLNPHSVTKSQVGLANVLNEKQATKTEFDQHAQDTIIHITASERTTWNAAESNSKKYTDAHSQNTNNP
HKVTAIQVGLGNLTNDKQATKLEFDAHIKDNERHITSTERSKWNSAQLTKISSDDGQPLVSITSDFHSELLNSPTLTYFG
YDKAALEAPPSNGRGFWTCSADKLYGQAIVLTNDNKTYRKSLINGAWSSWERLISSSEIDNVPWLSVTYKNGAKTGSRPL
QYRKVAGTLQLSGHVVTNRDVVFASIPTEFSPTQGAVKSVEVSGTFGRSKLFVNSNGDLQLSGVSADNSAAITGYYIDVV
VPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMR_BACSU (O31966)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390008.1
- ProteinModelPortal:   O31966
- EnsemblBacteria:   EBBACT00000002945
- GeneID:   939147
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21250
- NMPDR:   fig|224308.1.peg.2131
- GenoList:   BSU21250
- GeneTree:   EBGT00050000000239
- ProtClustDB:   CLSK887453
- BioCyc:   BSUB:BSU21250-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44825; Mature: 44694

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSKYVGQLKQNNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDK
CCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SNPHLVTKEQVGLGNVLNNVQATKEEFDEHLNDTLNPHSVTKSQVGLANVLNEKQATKTE
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FDQHAQDTIIHITASERTTWNAAESNSKKYTDAHSQNTNNPHKVTAIQVGLGNLTNDKQA
HHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
TKLEFDAHIKDNERHITSTERSKWNSAQLTKISSDDGQPLVSITSDFHSELLNSPTLTYF
EEEEEEEEECCCCCEECCCHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEE
GYDKAALEAPPSNGRGFWTCSADKLYGQAIVLTNDNKTYRKSLINGAWSSWERLISSSEI
CCCHHEECCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
DNVPWLSVTYKNGAKTGSRPLQYRKVAGTLQLSGHVVTNRDVVFASIPTEFSPTQGAVKS
CCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCEEEECCCEEEEECCCCCCCCCCCEEE
VEVSGTFGRSKLFVNSNGDLQLSGVSADNSAAITGYYIDVVVPLN
EEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure 
SSSKYVGQLKQNNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDK
CCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SNPHLVTKEQVGLGNVLNNVQATKEEFDEHLNDTLNPHSVTKSQVGLANVLNEKQATKTE
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FDQHAQDTIIHITASERTTWNAAESNSKKYTDAHSQNTNNPHKVTAIQVGLGNLTNDKQA
HHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
TKLEFDAHIKDNERHITSTERSKWNSAQLTKISSDDGQPLVSITSDFHSELLNSPTLTYF
EEEEEEEEECCCCCEECCCHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEE
GYDKAALEAPPSNGRGFWTCSADKLYGQAIVLTNDNKTYRKSLINGAWSSWERLISSSEI
CCCHHEECCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
DNVPWLSVTYKNGAKTGSRPLQYRKVAGTLQLSGHVVTNRDVVFASIPTEFSPTQGAVKS
CCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCEEEECCCEEEEECCCCCCCCCCCEEE
VEVSGTFGRSKLFVNSNGDLQLSGVSADNSAAITGYYIDVVVPLN
EEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377