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The map label for this gene is yomS

Identifier: 16079183

GI number: 16079183

Start: 2242056

End: 2242412

Strand: Direct

Name: yomS

Synonym: BSU21240

Alternate gene names: 16079183

Gene position: 2242056-2242412 (Clockwise)

Preceding gene: 16079182

Following gene: 16079184

Centisome position: 53.18

GC content: 38.1

Gene sequence:

>357_bases
TTGACAGAAACGACTGAAAATGTCGTAATCACGATTCCAGACAAAACTTCATTTACATTTCACGAAGCCGCAACTTCCCC
ATCTGAAGGTGAAGAATTTGTAGTGGGTCATTTTCGGGAACTTACTGTTAAGATCTCTGGTTCCTCAACTTCACGAGAAA
TAAAGTTTTATGCAGTTGATGAAAATGGCGAAAAAACTGCACTTAGTGGCACCAATAAAACAGACTTCCAACTTGGGAGC
AGTACTTTAAATACTAATGAGTATTGGGACTTCGACATTGCTGGATTGTTTAAAGTTATGTTCGAAGTAGTTTCTGTTAC
TGGTGATGTAACTGTTAAAGGGATTGTGGTGAGTTAA

Upstream 100 bases:

>100_bases
ATGGAATAAGCTACAAGAGGATGGGCTTTTTGAATAAGTCCTCCCCTCTTGTTTTTCTAGATAAAAGACAGTTTTTATTC
AAATTAAGGAGGTGGAGTTG

Downstream 100 bases:

>100_bases
GATGAGCAGCAGTAAATACGTCGGTCAACTCAAACAAAACAATATTCAGATCAATTCATTAAGAGGATCCAATGACAGAG
CTGAAAAACATATGCTTGAG

Product: phage-related lytic exoenzyme; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVDENGEKTALSGTNKTDFQLGS
STLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS

Sequences:

>Translated_118_residues
MTETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVDENGEKTALSGTNKTDFQLGS
STLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS
>Mature_117_residues
TETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVDENGEKTALSGTNKTDFQLGSS
TLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMS_BACSU (O31965)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390007.1
- EnsemblBacteria:   EBBACT00000003725
- GeneID:   939152
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21240
- NMPDR:   fig|224308.1.peg.2130
- GenoList:   BSU21240
- GeneTree:   EBGT00050000002996
- ProtClustDB:   CLSK887140
- BioCyc:   BSUB:BSU21240-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12898; Mature: 12767

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVD
CCCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEC
ENGEKTALSGTNKTDFQLGSSTLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS
CCCCEEEECCCCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure 
TETTENVVITIPDKTSFTFHEAATSPSEGEEFVVGHFRELTVKISGSSTSREIKFYAVD
CCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEC
ENGEKTALSGTNKTDFQLGSSTLNTNEYWDFDIAGLFKVMFEVVSVTGDVTVKGIVVS
CCCCEEEECCCCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377