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The map label for this gene is yomU

Identifier: 16079181

GI number: 16079181

Start: 2240339

End: 2241136

Strand: Direct

Name: yomU

Synonym: BSU21220

Alternate gene names: 16079181

Gene position: 2240339-2241136 (Clockwise)

Preceding gene: 16079180

Following gene: 255767471

Centisome position: 53.14

GC content: 38.35

Gene sequence:

>798_bases
TTGGCAAAACAAACAGTAATCCATGAAGTTGGAAAAATTACAGCTAAACGTCTGAGCGATAATAAGGTTATTGCTTCAGG
TGTTACACAAATGACTCAGTTTTCCCAACAAGTTCAACAAGACTTTTTAAAAGGCGGATGGGGTAACCGAGACCTGTATG
TTATTAATTCAAGTAAAGAAGTATCGGGTAATGTCCGAAATGCTTTCTTTGATCTTGATTTCATGGCAATGCAGCAAGGT
GTAAAAATTGAAAACGAAACAATTTCTGTGTGGGAAGATGAAAGCTTAACAGTTAGTGATACTGGTACGGTTATCCTTTC
ATATCTCCCATTGTCTAAAGTTTCATTAACTAACGAAGATGGAGATCAAATTGAAGTTGACGCTGCATCTAAAACAGTTA
CTGTGCCTGATACCTTTGCAACCAAGGGTGAAGCTTTAGCAGTTCATTATCAAATTGAAGTTGAAGCCGAGACTGTTGAA
ATTAACGGTGAAAAATTCTCTGAGAATTACTACTTTGAAATTCACACAATTGAATACGATCCTAAGACTTCAAAAATCTA
CAGTGACCTTTATATTCAGCTCCCTAAAGTAAACTTCTCTGGTGAAGCAGATATGTCGTTTGAAGCAGGAAATGCATACA
CTCCGGAAATCGGCTATCGAGCCCTTGCTGATAATAACGGAAAAATCGGTAACTTTGCTCGTGTAAAACGTAAAGCTGAT
GGGACAAAGGGCGTTGTCACTAGTGATGAAGGAACTGGCTCATCTCAAAGCTCAGATCTTGGCGGAACAACTGAATAA

Upstream 100 bases:

>100_bases
GTCTTATCACCTGAGCACTAAAGATGCTAAAAATATCGAGCAATTATTTGGAGGCTAATTAACTTTAGTCTCTTTTTATT
TTTATTTAGGAGGAAACAAT

Downstream 100 bases:

>100_bases
TTAAGGAGGCGTTTATTATTGCTTTTTTAAACCAGGACGGTGATAAATACACCTCTGCAAAAGATGATGGGACAGGTAAT
CCCATAACAGCTGTATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MAKQTVIHEVGKITAKRLSDNKVIASGVTQMTQFSQQVQQDFLKGGWGNRDLYVINSSKEVSGNVRNAFFDLDFMAMQQG
VKIENETISVWEDESLTVSDTGTVILSYLPLSKVSLTNEDGDQIEVDAASKTVTVPDTFATKGEALAVHYQIEVEAETVE
INGEKFSENYYFEIHTIEYDPKTSKIYSDLYIQLPKVNFSGEADMSFEAGNAYTPEIGYRALADNNGKIGNFARVKRKAD
GTKGVVTSDEGTGSSQSSDLGGTTE

Sequences:

>Translated_265_residues
MAKQTVIHEVGKITAKRLSDNKVIASGVTQMTQFSQQVQQDFLKGGWGNRDLYVINSSKEVSGNVRNAFFDLDFMAMQQG
VKIENETISVWEDESLTVSDTGTVILSYLPLSKVSLTNEDGDQIEVDAASKTVTVPDTFATKGEALAVHYQIEVEAETVE
INGEKFSENYYFEIHTIEYDPKTSKIYSDLYIQLPKVNFSGEADMSFEAGNAYTPEIGYRALADNNGKIGNFARVKRKAD
GTKGVVTSDEGTGSSQSSDLGGTTE
>Mature_264_residues
AKQTVIHEVGKITAKRLSDNKVIASGVTQMTQFSQQVQQDFLKGGWGNRDLYVINSSKEVSGNVRNAFFDLDFMAMQQGV
KIENETISVWEDESLTVSDTGTVILSYLPLSKVSLTNEDGDQIEVDAASKTVTVPDTFATKGEALAVHYQIEVEAETVEI
NGEKFSENYYFEIHTIEYDPKTSKIYSDLYIQLPKVNFSGEADMSFEAGNAYTPEIGYRALADNNGKIGNFARVKRKADG
TKGVVTSDEGTGSSQSSDLGGTTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMU_BACSU (O31963)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390005.1
- ProteinModelPortal:   O31963
- EnsemblBacteria:   EBBACT00000003960
- GeneID:   939146
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21220
- NMPDR:   fig|224308.1.peg.2128
- GenoList:   BSU21220
- OMA:   ELEITME
- ProtClustDB:   CLSK254619
- BioCyc:   BSUB:BSU21220-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29050; Mature: 28919

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQTVIHEVGKITAKRLSDNKVIASGVTQMTQFSQQVQQDFLKGGWGNRDLYVINSSKE
CCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
VSGNVRNAFFDLDFMAMQQGVKIENETISVWEDESLTVSDTGTVILSYLPLSKVSLTNED
CCCCCHHEEECCCHHHHHCCCEEECCEEEEEECCCEEEECCCEEEEEECCCCEEEECCCC
GDQIEVDAASKTVTVPDTFATKGEALAVHYQIEVEAETVEINGEKFSENYYFEIHTIEYD
CCEEEEECCCCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCEEECCEEEEEEEEEEEC
PKTSKIYSDLYIQLPKVNFSGEADMSFEAGNAYTPEIGYRALADNNGKIGNFARVKRKAD
CCHHHEEEEEEEEEECCCCCCCCCEEEECCCEECCCCCEEEEECCCCCCCCHHHHHHHCC
GTKGVVTSDEGTGSSQSSDLGGTTE
CCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKQTVIHEVGKITAKRLSDNKVIASGVTQMTQFSQQVQQDFLKGGWGNRDLYVINSSKE
CCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
VSGNVRNAFFDLDFMAMQQGVKIENETISVWEDESLTVSDTGTVILSYLPLSKVSLTNED
CCCCCHHEEECCCHHHHHCCCEEECCEEEEEECCCEEEECCCEEEEEECCCCEEEECCCC
GDQIEVDAASKTVTVPDTFATKGEALAVHYQIEVEAETVEINGEKFSENYYFEIHTIEYD
CCEEEEECCCCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCEEECCEEEEEEEEEEEC
PKTSKIYSDLYIQLPKVNFSGEADMSFEAGNAYTPEIGYRALADNNGKIGNFARVKRKAD
CCHHHEEEEEEEEEECCCCCCCCCEEEECCCEECCCCCEEEEECCCCCCCCHHHHHHHCC
GTKGVVTSDEGTGSSQSSDLGGTTE
CCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377