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The map label for this gene is yojA

Identifier: 16079010

GI number: 16079010

Start: 2124850

End: 2126184

Strand: Reverse

Name: yojA

Synonym: BSU19520

Alternate gene names: 16079010

Gene position: 2126184-2124850 (Counterclockwise)

Preceding gene: 16079012

Following gene: 16079009

Centisome position: 50.44

GC content: 45.84

Gene sequence:

>1335_bases
ATGCCGATTTTAATTGTAGCTGTCGGAGTGCTGATTCTGTTATTTCTCATTATTAAAGTAAAATTAAATACCTTTGTCTC
ACTGATTGTCGTTTCATTTTTAGTAGCCATCGGACTTGGAATGGATATCAATAAAATTGTTCTTTCAATTGAGACTGGAA
TTGGCGGGCAGCTGGGGCATTTAGCTTTAGTGTTTGGACTTGGCGCGATGCTTGGGAGGCTTGTCTCAGATGCTGGGGGC
GGCTACCGGATCGCCATTACGCTGATTGACAAATTCGGGAGGAAACGAATACAGGCGGCGGTTGTGGTTGCCTCTTTTAT
CATCGGGATTGCCCTATTTTTTGAAGTCGGTCTTGTTCTGTTGATACCGATTGTTTACGCGATTGCTAAAGAATTAAAAA
TGCCTTTTCTGTATCTGGGAATCCCGATGGCCGCCGCCTTAAATGTTACTCACGGATTTTTGCCCCCGCATCCTGCTCCA
ACTGCTATCTCAGTTGCATATGGTGCCCATATTGGCCAGGTGCTGCTTTTTGGAATCATCATCGCTGTTCCGACAACTGT
GATTGCCGGGCCTTTATTTAATAAATTTGCGATGAAACGGTTTCCTGGTGCGTATCAAAAGCATGGAAACCTATCGGGGT
TAGGACCAAGGAAAGAATTTCAGCTGGATGAAACACCGGGCTTTGCGATCAGTGCTGTCACGTCTTTATTCCCGGTTATC
TTTATGGCAATGGCAACAATTTTTTCTTTATTATTGAGTGAACATTCAAAAGGAAAAGACATTATAGAATTTATCGGCAC
TCCGGGAACGGCAATGCTCATTTCGCTGTTGCTTGCACTCTATACGATGGGATATGCCCGTAAAATATCTATGCAGGAAA
TCGGCAGATCTATTTCAGAATCAATTTCGCAAATTGCGATGATGCTGCTCATCATAGGAGGGGGAGGAGCGTTTAAACAG
GTGCTGATTGACGGCGGAGTCGGCGATTATGTCGCTGATTTTTTCCGTCAAACAAACATGTCGCCGCTATTCGTTGCATG
GACCATCGCCGCGGTTCTGCGTCTGTGTCTAGGCTCTGCTACCGTGGCTGCGCTTACCACAGCGGGAATGGCAGCTCCGC
TTATGGAGGCTGGCAGTGTAAACCCTGCGTTAATGGTGCTTGCAACAGGAGCCGGCAGTGTCATTGCGTGTCATGTAAAT
GATGCAGGATTTTGGATGGTAAAGGAATTTTTCGGCTTGAGCATGAAAGAAACATTTCAAACCTGGACGCTGCTTACAAC
AGTTCTTTCGGTTACAGGGCTCGGCTGTGTGTTATTGGCAGGGCTTGTGATGTAA

Upstream 100 bases:

>100_bases
CGTTTTTAGTTATTAATGAAAGCGCTTTCTGTTCATCTAGGCATGAAAAGCGCCAAAACATTGTCGCGAGAATCATATAA
AACACTTTTGGAGGGGTACC

Downstream 100 bases:

>100_bases
CAATCATAGACAGTCCGTAGCCCAATCGTTTTTCTTCCTTGCTGAATACTTTACGTATAGGCAGACATAAAGGAGGAAAA
AATCATGTACCCTCATCATT

Product: H+/anion permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MPILIVAVGVLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLGHLALVFGLGAMLGRLVSDAGG
GYRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLVLLIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAP
TAISVAYGAHIGQVLLFGIIIAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPVI
FMAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSISESISQIAMMLLIIGGGGAFKQ
VLIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGSATVAALTTAGMAAPLMEAGSVNPALMVLATGAGSVIACHVN
DAGFWMVKEFFGLSMKETFQTWTLLTTVLSVTGLGCVLLAGLVM

Sequences:

>Translated_444_residues
MPILIVAVGVLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLGHLALVFGLGAMLGRLVSDAGG
GYRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLVLLIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAP
TAISVAYGAHIGQVLLFGIIIAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPVI
FMAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSISESISQIAMMLLIIGGGGAFKQ
VLIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGSATVAALTTAGMAAPLMEAGSVNPALMVLATGAGSVIACHVN
DAGFWMVKEFFGLSMKETFQTWTLLTTVLSVTGLGCVLLAGLVM
>Mature_443_residues
PILIVAVGVLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLGHLALVFGLGAMLGRLVSDAGGG
YRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLVLLIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAPT
AISVAYGAHIGQVLLFGIIIAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPVIF
MAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSISESISQIAMMLLIIGGGGAFKQV
LIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGSATVAALTTAGMAAPLMEAGSVNPALMVLATGAGSVIACHVND
AGFWMVKEFFGLSMKETFQTWTLLTTVLSVTGLGCVLLAGLVM

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family

Homologues:

Organism=Escherichia coli, GI2367370, Length=452, Percent_Identity=52.212389380531, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI48994935, Length=443, Percent_Identity=51.0158013544018, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1790716, Length=438, Percent_Identity=47.7168949771689, Blast_Score=409, Evalue=1e-115,
Organism=Escherichia coli, GI1790776, Length=452, Percent_Identity=37.1681415929204, Blast_Score=300, Evalue=9e-83,
Organism=Escherichia coli, GI1788707, Length=429, Percent_Identity=34.965034965035, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI48994939, Length=436, Percent_Identity=34.1743119266055, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1789097, Length=431, Percent_Identity=34.8027842227378, Blast_Score=225, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOJA_BACSU (O31862)

Other databases:

- EMBL:   AF026147
- EMBL:   AL009126
- PIR:   G69905
- RefSeq:   NP_389833.1
- ProteinModelPortal:   O31862
- EnsemblBacteria:   EBBACT00000003547
- GeneID:   939510
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19520
- NMPDR:   fig|224308.1.peg.1956
- GenoList:   BSU19520
- GeneTree:   EBGT00050000001372
- HOGENOM:   HBG649941
- OMA:   DEISESM
- PhylomeDB:   O31862
- BioCyc:   BSUB:BSU19520-MONOMER
- InterPro:   IPR003474
- TIGRFAMs:   TIGR00791

Pfam domain/function: PF02447 GntP_permease

EC number: NA

Molecular weight: Translated: 46809; Mature: 46678

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf3d37bc)-; HASH(0xf1933e0)-; HASH(0xea1dd74)-; HASH(0xfd5252c)-; HASH(0xf800970)-; HASH(0xefbf0d4)-; HASH(0xc0d5dec)-; HASH(0xf928430)-; HASH(0x10094254)-; HASH(0xe7e0ab0)-; HASH(0xfc96444)-; HASH(0xd97d94c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILIVAVGVLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCHHHH
LALVFGLGAMLGRLVSDAGGGYRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLVL
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAPTAISVAYGAHIGQVLLFGII
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
IAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPVI
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FMAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSISE
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SISQIAMMLLIIGGGGAFKQVLIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGSA
HHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH
TVAALTTAGMAAPLMEAGSVNPALMVLATGAGSVIACHVNDAGFWMVKEFFGLSMKETFQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
TWTLLTTVLSVTGLGCVLLAGLVM
HHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
PILIVAVGVLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCHHHH
LALVFGLGAMLGRLVSDAGGGYRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLVL
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAPTAISVAYGAHIGQVLLFGII
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
IAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPVI
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FMAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSISE
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SISQIAMMLLIIGGGGAFKQVLIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGSA
HHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH
TVAALTTAGMAAPLMEAGSVNPALMVLATGAGSVIACHVNDAGFWMVKEFFGLSMKETFQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
TWTLLTTVLSVTGLGCVLLAGLVM
HHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377