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The map label for this gene is yocC

Identifier: 16078976

GI number: 16078976

Start: 2087696

End: 2088193

Strand: Direct

Name: yocC

Synonym: BSU19160

Alternate gene names: 16078976

Gene position: 2087696-2088193 (Clockwise)

Preceding gene: 16078973

Following gene: 16078977

Centisome position: 49.52

GC content: 37.95

Gene sequence:

>498_bases
TTGTTTACTGTTAAAGAAAAAAATCGTCAAGAGCTTGAGGAAGAACTAAATGATTTAGAATTTCAAATTTATCGCATGCA
GGAGAATATGAAGGATTTATCTAAAGATGCCAAAGTGCTTGGTATTGATCAATCGAAACATGATGAGTGGATGATTGTTT
CCTCGATTGATGATGGCCAAACATGCAAAATTATGCTAACTGATTGTAAAACGGCATACCGAGGAAAAGGCTGTTTTTCA
CTTGTAGCGTCTTACAAGGACGATGCCATTCATATAGGGGATATAAAAGGCCCTCCGAATCACGGGTTTGGCTCCATTTG
CATGAAATATTTAAAAGATATTGCAAGAGACCATAATATACCGAAAGTCACCGGAGACATCGCCAAACGGGATTGGAATC
ATGTAGACCGGCTGATTCACTTTTATGAAAAACATCACTTCAAAGTATGTATCGATCATGATACCCAATCCGGCAGCATT
AAGTGGGTTGATTTGTAA

Upstream 100 bases:

>100_bases
CTAATTTCTAGTAATAATGGAATTGTTGTTTACAATACGCCTCTCTTCTAATACAATTGGTAACTGTGTTTCTAAGCTGT
TTTTTGAAAGGAGTTTGATC

Downstream 100 bases:

>100_bases
AAAAGTCTGGAAGAAAGAGCCAAGATATGCTGTAATGGTATAAAACCATTGATGGAGGGTTCTATGTACGCCTCAAAACT
GAAAAAGGGAGACGAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFTVKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQTCKIMLTDCKTAYRGKGCFS
LVASYKDDAIHIGDIKGPPNHGFGSICMKYLKDIARDHNIPKVTGDIAKRDWNHVDRLIHFYEKHHFKVCIDHDTQSGSI
KWVDL

Sequences:

>Translated_165_residues
MFTVKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQTCKIMLTDCKTAYRGKGCFS
LVASYKDDAIHIGDIKGPPNHGFGSICMKYLKDIARDHNIPKVTGDIAKRDWNHVDRLIHFYEKHHFKVCIDHDTQSGSI
KWVDL
>Mature_165_residues
MFTVKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQTCKIMLTDCKTAYRGKGCFS
LVASYKDDAIHIGDIKGPPNHGFGSICMKYLKDIARDHNIPKVTGDIAKRDWNHVDRLIHFYEKHHFKVCIDHDTQSGSI
KWVDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOCC_BACSU (O35042)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   H69900
- RefSeq:   NP_389797.1
- ProteinModelPortal:   O35042
- EnsemblBacteria:   EBBACT00000002059
- GeneID:   939666
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19160
- NMPDR:   fig|224308.1.peg.1920
- GenoList:   BSU19160
- GeneTree:   EBGT00050000001466
- HOGENOM:   HBG338070
- OMA:   DRLIHFY
- ProtClustDB:   CLSK873173
- BioCyc:   BSUB:BSU19160-MONOMER
- InterPro:   IPR016181
- Gene3D:   G3DSA:3.40.630.30

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19160; Mature: 19160

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTVKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC
TCKIMLTDCKTAYRGKGCFSLVASYKDDAIHIGDIKGPPNHGFGSICMKYLKDIARDHNI
EEEEEEECCCHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
PKVTGDIAKRDWNHVDRLIHFYEKHHFKVCIDHDTQSGSIKWVDL
CCCCHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MFTVKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC
TCKIMLTDCKTAYRGKGCFSLVASYKDDAIHIGDIKGPPNHGFGSICMKYLKDIARDHNI
EEEEEEECCCHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
PKVTGDIAKRDWNHVDRLIHFYEKHHFKVCIDHDTQSGSIKWVDL
CCCCHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377