Click here to switch to the map view.

The map label for this gene is yoaR

Identifier: 16078932

GI number: 16078932

Start: 2041928

End: 2042839

Strand: Reverse

Name: yoaR

Synonym: BSU18720

Alternate gene names: 16078932

Gene position: 2042839-2041928 (Counterclockwise)

Preceding gene: 16078936

Following gene: 255767442

Centisome position: 48.46

GC content: 43.42

Gene sequence:

>912_bases
ATGATACAAATTTTGATCACTGGTCTTTTTTTATTGGCTCAGCCGAGTGAGCCGCAGGACAGTTTAACGGTCACACAGCA
AGGACGGACGATTGCCACTGTTAACCGTGAAGACTTTACAATGCCTCTTCCCGGCACTCCAATGGTTGACTATGAAAAAT
ACAGTAAATTCATCAAACAGCTTGATCAGAAAGTGTACCGTGAGCCGATAAATGCTGTCCTTAACGATCATGGAAGCATC
GTCCCGGGCAGGGTTGGCTACAAACTGTATCAACAGGCGTTTATGGAAAAGTTTTATGCGTATTTTTATGGGCAAGGTCC
CTCCAAGATAGAAGTGCCGGAAATGAACATTTATCCGAAAGTTGACAGCGAGCTGCTAGCTCACATCAGTACGCAGCAGC
TTGGTCAGTACGTGACGTATTTTAACTCAAGCAATAAAAGCCGTTCACACAATATTTCTCTTTCTGCAAAAGCAATCGAC
AATCACGTTGTTTTCCCTAATGAGACGTTTTCGTTTAACCAAGTTGTGGGAATGAGAACTCGGAACAAAGGATATAAAAG
TGCACCCATTATTGTAAAAGGGGAGTTGTCTGAAGGTGTAGGAGGAGGAATTTGTCAGGTGTCCTCAACTCTATTTAATG
CAGTAGATCGTGCAGGACTGCAGATCGTTCAGCGCTATTCTCATACTAGAAGTGTACCATATGTACCGCCCGGACGGGAT
GCGACGGTAAGCTGGGGAGGTCCTGACTTTCGCTTTCAAAACCAATATAACCAACCAATCTTAATTCGGGCAAAAAGGTA
TGGGGGAAGTATGATTATTACGCTATACTCTTCTGATGTGATTAACAGCAGATTGAGAAAAATCCCCAAAGCTCCTTCTC
GGATACCGAAAGAAATAAATGCAGAGCAGTAA

Upstream 100 bases:

>100_bases
AGGTTTTTATCAACGTCTAAAGATTCAAACAAACGATGGGAAGAAATACATCAAAGGATAAGCGGCTGTTCATACTAATG
ATTGGGAGGTAAACCGACTT

Downstream 100 bases:

>100_bases
AGACAAAACCTCAGGTAAGGTTTTGGTTAAGAGAGCTTGTAGATTGCTCAAAATCAATTCTTTAAGGAGCGGCCAGTGAA
AGGAAGGAGGGATAAATGAA

Product: factor for cell wall maintenance or synthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIQILITGLFLLAQPSEPQDSLTVTQQGRTIATVNREDFTMPLPGTPMVDYEKYSKFIKQLDQKVYREPINAVLNDHGSI
VPGRVGYKLYQQAFMEKFYAYFYGQGPSKIEVPEMNIYPKVDSELLAHISTQQLGQYVTYFNSSNKSRSHNISLSAKAID
NHVVFPNETFSFNQVVGMRTRNKGYKSAPIIVKGELSEGVGGGICQVSSTLFNAVDRAGLQIVQRYSHTRSVPYVPPGRD
ATVSWGGPDFRFQNQYNQPILIRAKRYGGSMIITLYSSDVINSRLRKIPKAPSRIPKEINAEQ

Sequences:

>Translated_303_residues
MIQILITGLFLLAQPSEPQDSLTVTQQGRTIATVNREDFTMPLPGTPMVDYEKYSKFIKQLDQKVYREPINAVLNDHGSI
VPGRVGYKLYQQAFMEKFYAYFYGQGPSKIEVPEMNIYPKVDSELLAHISTQQLGQYVTYFNSSNKSRSHNISLSAKAID
NHVVFPNETFSFNQVVGMRTRNKGYKSAPIIVKGELSEGVGGGICQVSSTLFNAVDRAGLQIVQRYSHTRSVPYVPPGRD
ATVSWGGPDFRFQNQYNQPILIRAKRYGGSMIITLYSSDVINSRLRKIPKAPSRIPKEINAEQ
>Mature_303_residues
MIQILITGLFLLAQPSEPQDSLTVTQQGRTIATVNREDFTMPLPGTPMVDYEKYSKFIKQLDQKVYREPINAVLNDHGSI
VPGRVGYKLYQQAFMEKFYAYFYGQGPSKIEVPEMNIYPKVDSELLAHISTQQLGQYVTYFNSSNKSRSHNISLSAKAID
NHVVFPNETFSFNQVVGMRTRNKGYKSAPIIVKGELSEGVGGGICQVSSTLFNAVDRAGLQIVQRYSHTRSVPYVPPGRD
ATVSWGGPDFRFQNQYNQPILIRAKRYGGSMIITLYSSDVINSRLRKIPKAPSRIPKEINAEQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAR_BACSU (O34611)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   C69897
- RefSeq:   NP_389753.1
- ProteinModelPortal:   O34611
- EnsemblBacteria:   EBBACT00000001170
- GeneID:   939962
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18720
- NMPDR:   fig|224308.1.peg.1875
- GenoList:   BSU18720
- GeneTree:   EBGT00050000003665
- HOGENOM:   HBG362783
- OMA:   QRYSHSR
- ProtClustDB:   CLSK238331
- BioCyc:   BSUB:BSU18720-MONOMER
- InterPro:   IPR022029
- InterPro:   IPR007391

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW

EC number: NA

Molecular weight: Translated: 34084; Mature: 34084

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQILITGLFLLAQPSEPQDSLTVTQQGRTIATVNREDFTMPLPGTPMVDYEKYSKFIKQ
CEEEEEEHHHHEECCCCCCCCEEEEECCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHH
LDQKVYREPINAVLNDHGSIVPGRVGYKLYQQAFMEKFYAYFYGQGPSKIEVPEMNIYPK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
VDSELLAHISTQQLGQYVTYFNSSNKSRSHNISLSAKAIDNHVVFPNETFSFNQVVGMRT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEECCCCCCCHHHEECEEE
RNKGYKSAPIIVKGELSEGVGGGICQVSSTLFNAVDRAGLQIVQRYSHTRSVPYVPPGRD
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ATVSWGGPDFRFQNQYNQPILIRAKRYGGSMIITLYSSDVINSRLRKIPKAPSRIPKEIN
CEEECCCCCCEECCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHCCCCHHHCCCCCC
AEQ
CCC
>Mature Secondary Structure
MIQILITGLFLLAQPSEPQDSLTVTQQGRTIATVNREDFTMPLPGTPMVDYEKYSKFIKQ
CEEEEEEHHHHEECCCCCCCCEEEEECCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHH
LDQKVYREPINAVLNDHGSIVPGRVGYKLYQQAFMEKFYAYFYGQGPSKIEVPEMNIYPK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
VDSELLAHISTQQLGQYVTYFNSSNKSRSHNISLSAKAIDNHVVFPNETFSFNQVVGMRT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEECCCCCCCHHHEECEEE
RNKGYKSAPIIVKGELSEGVGGGICQVSSTLFNAVDRAGLQIVQRYSHTRSVPYVPPGRD
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ATVSWGGPDFRFQNQYNQPILIRAKRYGGSMIITLYSSDVINSRLRKIPKAPSRIPKEIN
CEEECCCCCCEECCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHCCCCHHHCCCCCC
AEQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377