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The map label for this gene is ynfC

Identifier: 16078872

GI number: 16078872

Start: 1938066

End: 1938476

Strand: Reverse

Name: ynfC

Synonym: BSU18110

Alternate gene names: 16078872

Gene position: 1938476-1938066 (Counterclockwise)

Preceding gene: 16078876

Following gene: 16078868

Centisome position: 45.98

GC content: 41.61

Gene sequence:

>411_bases
ATGGATTGGGGTATTATTATAAAAATATTCAGTAATATTAAAGGAGGGGGAGATCATTTGAAAAAAGTAACGATATTGAA
AGCATCCATCTTATTCTTGGCGATTGCCAGTTTTCATTTGTTCTCAATTCCCCACGCCTTTGATATCGGCCATCATTATA
AAGCCGTAGCCGACCAGCAGGAAATGCATGAGATGAAAGCCGGCCAAAATGCTGATGATGAGAAGAAATCCATCACAGGG
GCATTTACGCTGACCGCTTTATGGGCAATGGCTGTTCTGCTGCTGACCGCTGAAAGCAAAAGTACGGGATACTCCCGCAG
ACGTCAGCGGAAAAAAAGCTTTATACTGGCCAAATTTTATCAATCGTCTTATTTCGGCAAACTTCATGTTCAACATCACC
CGATTATGTAA

Upstream 100 bases:

>100_bases
CTAATAAAAGAAGTTTTCTCTTTCAAAAATAAGCAAAAAGATATATACTTAACAAAGTTAAATTTATTTTTAAATTTAAT
AAATCAGGTTTACTTTTAGG

Downstream 100 bases:

>100_bases
CGAAAATATGAGGAGGCTGTTAAACATGTTGTTTATCTTAAGAATGGTGATTTTAGGCTTATTTTCTTTCACAGCGCTGA
ATTTATTTGTATGGCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MDWGIIIKIFSNIKGGGDHLKKVTILKASILFLAIASFHLFSIPHAFDIGHHYKAVADQQEMHEMKAGQNADDEKKSITG
AFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKFYQSSYFGKLHVQHHPIM

Sequences:

>Translated_136_residues
MDWGIIIKIFSNIKGGGDHLKKVTILKASILFLAIASFHLFSIPHAFDIGHHYKAVADQQEMHEMKAGQNADDEKKSITG
AFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKFYQSSYFGKLHVQHHPIM
>Mature_136_residues
MDWGIIIKIFSNIKGGGDHLKKVTILKASILFLAIASFHLFSIPHAFDIGHHYKAVADQQEMHEMKAGQNADDEKKSITG
AFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKFYQSSYFGKLHVQHHPIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNFC_BACSU (Q45067)

Other databases:

- EMBL:   Z73234
- EMBL:   AL009126
- PIR:   C69892
- RefSeq:   NP_389693.1
- EnsemblBacteria:   EBBACT00000001159
- GeneID:   937092
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18110
- NMPDR:   fig|224308.1.peg.1814
- GenoList:   BSU18110
- GeneTree:   EBGT00050000002927
- HOGENOM:   HBG338042
- OMA:   FYQSSYF
- ProtClustDB:   CLSK887360
- BioCyc:   BSUB:BSU18110-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15374; Mature: 15374

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xeb508b4)-; HASH(0xdb8db34)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWGIIIKIFSNIKGGGDHLKKVTILKASILFLAIASFHLFSIPHAFDIGHHYKAVADQQ
CCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHH
EMHEMKAGQNADDEKKSITGAFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKFY
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QSSYFGKLHVQHHPIM
HCCCCEEEEECCCCCH
>Mature Secondary Structure
MDWGIIIKIFSNIKGGGDHLKKVTILKASILFLAIASFHLFSIPHAFDIGHHYKAVADQQ
CCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHH
EMHEMKAGQNADDEKKSITGAFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKFY
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QSSYFGKLHVQHHPIM
HCCCCEEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377