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The map label for this gene is yneI

Identifier: 16078857

GI number: 16078857

Start: 1924030

End: 1924392

Strand: Direct

Name: yneI

Synonym: BSU17940

Alternate gene names: 16078857

Gene position: 1924030-1924392 (Clockwise)

Preceding gene: 16078856

Following gene: 16078858

Centisome position: 45.64

GC content: 45.45

Gene sequence:

>363_bases
ATGACAAGAGTTTTAGTTGTAGACGACGCCAAGTTCATGAGAGTGAAAATCAGAGAGATCTTGGAAGAGGCAAATTACAT
AATCGCAGGCGAAGCGGCGGACGGTGAACAAGCAGCTGACCTGTATAAAAAACTGCGCCCGGACCTTGTGACAATGGATA
TTACAATGCCGGTGAAAAACGGCATAAAAGCGCTTCGTGATATCTTAACCTTTGATCCTAAAGCGAAGGTCATCATGTGC
ACCGCCATGCGCCAGCAAAGAATTGTAACGGAAGCAATTGAGCTGGGGGCAAAGGATTTTATTGTTAAGCCGTTTGAGGA
AACAAAAGTGCTGGAAGCTGTAAGCCGCGTTATGGGACATTAA

Upstream 100 bases:

>100_bases
ACTGGTTTTTGACGGTAAATTACTTTCGTACTACTACTAATCCTTTTGTTTTTGGTACAATAAGACTATTATCTGTGGAA
ATCGATTGTTGGAGGGGAAT

Downstream 100 bases:

>100_bases
AGTCATTTCTTTTCAAAATGGTTTTTTTTATTGTTTTGGAGTATAGTATATAGTATCAACACTCCGAGAAACAAAGGAAT
GATAAGTATGATGATTATAG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAKVIMC
TAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH

Sequences:

>Translated_120_residues
MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAKVIMC
TAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH
>Mature_119_residues
TRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAKVIMCT
AMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=34.8623853211009, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1788222, Length=118, Percent_Identity=33.0508474576271, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1788192, Length=105, Percent_Identity=35.2380952380952, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCDB_BACSU (P45709)

Other databases:

- EMBL:   X87845
- EMBL:   Z73234
- EMBL:   AL009126
- PIR:   S57405
- RefSeq:   NP_389677.1
- ProteinModelPortal:   P45709
- SMR:   P45709
- EnsemblBacteria:   EBBACT00000001493
- GeneID:   939468
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17940
- NMPDR:   fig|224308.1.peg.1798
- GenoList:   BSU17940
- GeneTree:   EBGT00070000031787
- HOGENOM:   HBG753323
- OMA:   GHTIVAE
- ProtClustDB:   CLSK887355
- BioCyc:   BSUB:BSU17940-MONOMER
- InterPro:   IPR011006
- InterPro:   IPR001789
- SMART:   SM00448

Pfam domain/function: PF00072 Response_reg; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 13536; Mature: 13405

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKN
CCEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHH
GIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKN
CEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHH
GIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377