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The map label for this gene is yndL

Identifier: 16078845

GI number: 16078845

Start: 1915221

End: 1915979

Strand: Direct

Name: yndL

Synonym: BSU17820

Alternate gene names: 16078845

Gene position: 1915221-1915979 (Clockwise)

Preceding gene: 16078844

Following gene: 16078847

Centisome position: 45.43

GC content: 40.18

Gene sequence:

>759_bases
ATGAAACCGGCCAAAGTATCCCTGCTCCGCCGTTTGCTCCATTCCTTGAAGCATGTTGATTGTAACATAGCCAAACGTTT
TCCATCAACTATTAAAATTGTAAAATTATTGATGATTTTTATGGTGTTTACTCCGATTTCTTCAATTTATGCTGAAGATG
TATATCAGAATTTTGAGGAATTAAAAAACAATGAAGATCCTTCTGATTATGGCGTTGTTACGAAAGAAACCGGAAGCCCT
GTTCTTGTTTTAGCTATTCACGGAGGAGGTATTGAAGGCGGGACAAGTGAAGTAGCGAGAGAGCTCAGCAAAGAGTACTC
GATGTATTTATTTGAAGGCTTAAAATCGGCAGGAAACTCAGTCCTGCACATTACGAGCACACACTTTGATGAACCTCGGG
CCCTTAAAATGACGGGAAATCATGAATATGTCATTTCATTACACGGGTACGCAGAAGAAGATCAGCAGATCGAAGTCGGC
GGTACAGATCGCGTAAGAGCGGCAGATTTAGTTGAGAAATTGCAGCATGCCGGTTTTCCTGCTGTATTGCTCAATATGGA
CCATCCGCATGCGGGCGTTAGTCCGAATAACATTGCAAATAAATCAAAAACAGGTTTAAGTATTCAGATAGAAATGAGCA
CAGGGTTTCGAAAGTCTTTGTTCGGCATCTTTTCTTTAAAAAGCAGAGCTGTTACTCAAAATGAGAGGTTTTATGAGTTT
ACAGAAGTGATGTTCCGTTTTCTCAAAAATAGCTACTGA

Upstream 100 bases:

>100_bases
TTGTGAATTTAACAAAAATTTAACAAGGAGGACGAGAGAATTCGTGCTAAAGCCTCAAAGAGACCTACATTCTGTTGATT
TGGACTTAGAGGCGGAGTAG

Downstream 100 bases:

>100_bases
AAAATAGGAGGCGATAAGACAGCCTCCTATTCCTTATGCTTCTCTTTCGTTTCGGGAAACAGCTCGTCCGCGGCTTCCGT
TTGATACTGCAACGTGTTAT

Product: phage-related replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEELKNNEDPSDYGVVTKETGSP
VLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVG
GTDRVRAADLVEKLQHAGFPAVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEF
TEVMFRFLKNSY

Sequences:

>Translated_252_residues
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEELKNNEDPSDYGVVTKETGSP
VLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVG
GTDRVRAADLVEKLQHAGFPAVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEF
TEVMFRFLKNSY
>Mature_252_residues
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEELKNNEDPSDYGVVTKETGSP
VLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVG
GTDRVRAADLVEKLQHAGFPAVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEF
TEVMFRFLKNSY

Specific function: Unknown

COG id: COG4195

COG function: function code R; Phage-related replication protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0714 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNDL_BACSU (O31815)

Other databases:

- EMBL:   AL009126
- PIR:   C69890
- RefSeq:   NP_389665.1
- ProteinModelPortal:   O31815
- EnsemblBacteria:   EBBACT00000003983
- GeneID:   939553
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17820
- NMPDR:   fig|224308.1.peg.1786
- GenoList:   BSU17820
- GeneTree:   EBGT00050000001427
- HOGENOM:   HBG668948
- OMA:   SIQIEMS
- ProtClustDB:   CLSK887348
- BioCyc:   BSUB:BSU17820-MONOMER
- InterPro:   IPR008585

Pfam domain/function: PF05908 DUF867

EC number: NA

Molecular weight: Translated: 28219; Mature: 28219

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcc45f48)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEE
CCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNS
HHCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVGGTDRVRAADLVEKLQHAGFP
EEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCC
AVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEF
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHH
TEVMFRFLKNSY
HHHHHHHHHCCH
>Mature Secondary Structure
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEE
CCCHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNS
HHCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVGGTDRVRAADLVEKLQHAGFP
EEEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCC
AVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEF
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHH
TEVMFRFLKNSY
HHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377