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The map label for this gene is spoVS

Identifier: 16078761

GI number: 16078761

Start: 1769935

End: 1770195

Strand: Direct

Name: spoVS

Synonym: BSU16980

Alternate gene names: 16078761

Gene position: 1769935-1770195 (Clockwise)

Preceding gene: 255767390

Following gene: 16078762

Centisome position: 41.99

GC content: 48.28

Gene sequence:

>261_bases
ATGGAAATCTTAAAAGTTTCAGCAAAATCGAGTCCAAATTCAGTGGCAGGTGCGCTTGCAGGCGTGTTGAGAGAGCGAGG
AGCCGCCGAGATTCAAGCGATCGGAGCGGGTGCATTAAACCAGGCTGTAAAAGCTGTGGCGATTGCCAGGGGATTTGTGG
CGCCAAGCGGCGTTGATTTGATTTGTATTCCGGCTTTTACAGATATTCAAATCGATGGGGAAGAAAGAACAGCGATTAAA
TTAATCGTGGAGCCTCGCTAA

Upstream 100 bases:

>100_bases
TGAAAAGCATTGTGGGGATGGCTTTTTGGATAGCAACATCTAATAATGATTGTTCTAATGAACACTCACTTATCCATTGT
AAAACTAAGGGGGAGCAGAA

Downstream 100 bases:

>100_bases
AAACAAATAAAGCATTCTCAACCTGTTTGCGTAATGCAAACAGGTTGTTTTTCATTTATTGTGATATTTTCTCCCGATAG
TATTTTTAGCACATAAATGA

Product: stage V sporulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEILKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDIQIDGEERTAIK
LIVEPR

Sequences:

>Translated_86_residues
MEILKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDIQIDGEERTAIK
LIVEPR
>Mature_86_residues
MEILKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDLICIPAFTDIQIDGEERTAIK
LIVEPR

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SP5S_BACSU (P45693)

Other databases:

- EMBL:   U27501
- EMBL:   AL009126
- PIR:   E69716
- RefSeq:   NP_389580.1
- ProteinModelPortal:   P45693
- SMR:   P45693
- EnsemblBacteria:   EBBACT00000000232
- GeneID:   939460
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16980
- NMPDR:   fig|224308.1.peg.1701
- GenoList:   BSU16980
- GeneTree:   EBGT00050000000791
- HOGENOM:   HBG403812
- OMA:   KLIIEPR
- ProtClustDB:   CLSK873305
- BioCyc:   BSUB:BSU16980-MONOMER
- InterPro:   IPR007347
- ProDom:   PD061837

Pfam domain/function: PF04232 SpoVS

EC number: NA

Molecular weight: Translated: 8796; Mature: 8796

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDL
CCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIQIDGEERTAIKLIVEPR
EEECCEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MEILKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGALNQAVKAVAIARGFVAPSGVDL
CCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIQIDGEERTAIKLIVEPR
EEECCEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377