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The map label for this gene is ylxY

Identifier: 16078733

GI number: 16078733

Start: 1741618

End: 1742577

Strand: Direct

Name: ylxY

Synonym: BSU16700

Alternate gene names: 16078733

Gene position: 1741618-1742577 (Clockwise)

Preceding gene: 16078732

Following gene: 255767376

Centisome position: 41.31

GC content: 40.1

Gene sequence:

>960_bases
ATGTACAAAAAATTTGTACCGTTTGCCGTTTTTTTATTTCTTTTTTTTGTCTCATTTGAGATGATGGAAAATCCGCATGC
ACTTGATTATATAGGGGCAATGAAAAAAGATACGGTGACTGTCACGGCGTCAAAAGACCCGTTATATGAAGAATTGCTTC
AAAAAGCGCCGGAGTACGAAGTTAAGCCCCAGAATGCAAGAATTGATAAAGTGTGGAAAAGCATTCCAGGCTACAATGGA
TTAAAGGTCAATATTGAACAATCATATAAAAAAATGAAACAGCATGGTAAGTTTCGGGAAAAAGATTTGGTGTACAGTCA
AGTAAAACCAAGTGTTCATCTTGAGTCACTTCAGCCTGAGCCTATTTATAAAGGAAATCCTGACAAACCGATGGTGGCTT
TTTTAATCAATGTGGCATGGGGAAATGAGTATTTGGAAAAAATGCTTCCTATTCTGCAAAAGCACCAGGTTAAAGCTACG
TTCTTTTTAGAAGGCAATTGGGTGAGAAACAATGTACAGCTCGCTAAGAAGATTGCAAAAGACGGACATGAAATCGGAAA
TCATTCATACAATCATCCGGATATGAGCAAACTGACTACAGGAAGAATTTCCGAGCAGCTCGACAAGACTAATGAACAAA
TAGAACAAACGATCGGCGTTAAGCCAAAGTGGTTCGCTCCGCCAAGCGGAAGTTTCAGAAAAGCGGTTATCGACATTGCA
GCAGAGAAACAGATGGGAACAGTCATGTGGACAGTTGATACAATCGATTGGCAAAAGCCGGCTCCGTCTGTACTTCAGAC
GAGAGTGTTAAGCAAGATACATAATGGTGCCATGATTTTAATGCATCCGACTGACCCTACGGCGGAAAGTCTTGAAGCGC
TGATTACACAGATAAAAGACAAAGGATATGCGCTTGGAACAGTCACTGAACTAATGGATGAAACAAGACTATTGAAGTAA

Upstream 100 bases:

>100_bases
GCCTGGGAGACCCGGCTTCTTTATTTTGAAGCTTTTCAAAAGCAGGCGGGTTCTACCTTGTCCTTCTCCTTCATAATGTG
AGGTGAGGGGGGGACAGAAC

Downstream 100 bases:

>100_bases
CAGATGAAGGCAGCTTGTCTTTGAATAGGAGGAACAAATTTGATTAAACGATATACGTGTCAAAATGGTGTAAGAATTGT
GCTGGAAAATAACCCGACAG

Product: sugar deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDPLYEELLQKAPEYEVKPQNARIDKVWKSIPGYNG
LKVNIEQSYKKMKQHGKFREKDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKAT
FFLEGNWVRNNVQLAKKIAKDGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIA
AEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKDKGYALGTVTELMDETRLLK

Sequences:

>Translated_319_residues
MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDPLYEELLQKAPEYEVKPQNARIDKVWKSIPGYNG
LKVNIEQSYKKMKQHGKFREKDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKAT
FFLEGNWVRNNVQLAKKIAKDGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIA
AEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKDKGYALGTVTELMDETRLLK
>Mature_319_residues
MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDPLYEELLQKAPEYEVKPQNARIDKVWKSIPGYNG
LKVNIEQSYKKMKQHGKFREKDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKAT
FFLEGNWVRNNVQLAKKIAKDGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIA
AEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKDKGYALGTVTELMDETRLLK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLXY_BACSU (P50850)

Other databases:

- EMBL:   AL009126
- EMBL:   U29668
- PIR:   H69882
- RefSeq:   NP_389552.1
- ProteinModelPortal:   P50850
- SMR:   P50850
- EnsemblBacteria:   EBBACT00000001226
- GeneID:   939649
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16700
- NMPDR:   fig|224308.1.peg.1673
- GenoList:   BSU16700
- GeneTree:   EBGT00070000031813
- HOGENOM:   HBG313609
- OMA:   KWFAPPS
- ProtClustDB:   CLSK2460923
- BioCyc:   BSUB:BSU16700-MONOMER
- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916
- Gene3D:   G3DSA:3.20.20.370
- TIGRFAMs:   TIGR02873

Pfam domain/function: PF01522 Polysacc_deac_1; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 36466; Mature: 36466

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDPLYEELLQKAPEYE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCC
VKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKQHGKFREKDLVYSQVKPSVHLESLQPE
CCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCC
PIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKATFFLEGNWVRNNVQLAKKIAK
CCCCCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHHHHHHHHH
DGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKD
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
KGYALGTVTELMDETRLLK
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDPLYEELLQKAPEYE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCC
VKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKQHGKFREKDLVYSQVKPSVHLESLQPE
CCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCC
PIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKATFFLEGNWVRNNVQLAKKIAK
CCCCCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHHHHHHHHH
DGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKD
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
KGYALGTVTELMDETRLLK
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779