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The map label for this gene is ylpC

Identifier: 16078651

GI number: 16078651

Start: 1661967

End: 1662533

Strand: Direct

Name: ylpC

Synonym: BSU15880

Alternate gene names: 16078651

Gene position: 1661967-1662533 (Clockwise)

Preceding gene: 16078650

Following gene: 16078652

Centisome position: 39.42

GC content: 44.44

Gene sequence:

>567_bases
ATGAGAAGAAATAAGAGAGAACGCCAGGAATTACTTCAGCAGACGATTCAAGCAACCCCCTTTATTACAGATGAAGAACT
AGCGGGTAAATTCGGGGTGAGCATCCAGACGATACGTTTGGACCGCTTAGAGCTTTCCATACCTGAACTGAGAGAAAGAA
TTAAGAACGTGGCAGAGAAAACACTTGAGGACGAAGTGAAGTCCCTGTCACTTGATGAAGTTATCGGAGAAATTATTGAC
CTTGAGCTGGATGATCAGGCGATATCCATTTTAGAAATAAAACAGGAGCACGTGTTCAGCCGGAATCAGATTGCGAGAGG
ACACCATTTATTTGCACAGGCGAATTCTTTGGCCGTTGCAGTCATTGATGACGAGCTGGCGCTGACTGCAAGTGCAGACA
TCCGCTTTACAAGACAGGTAAAGCAGGGTGAACGTGTCGTAGCAAAAGCGAAAGTGACGGCTGTCGAAAAAGAAAAAGGA
AGAACGGTTGTCGAAGTGAACAGCTACGTTGGCGAAGAAATTGTTTTTTCTGGACGCTTTGACATGTATCGTTCAAAACA
TTCATAA

Upstream 100 bases:

>100_bases
AGTTTTTGGTGTTCAGCCAGAAACAATCGTTGCATTCCAATCTATGAAATTATATACTACTATTAGTACCTAGTCTTAAT
TGTCCGGATGGTGTTTAGAT

Downstream 100 bases:

>100_bases
AGGTGGAGCATGCATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGTTATTGACGGAGTTATAA
AAGGTATAGAGGCATTTGAT

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIID
LELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKG
RTVVEVNSYVGEEIVFSGRFDMYRSKHS

Sequences:

>Translated_188_residues
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIID
LELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKG
RTVVEVNSYVGEEIVFSGRFDMYRSKHS
>Mature_188_residues
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIID
LELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKG
RTVVEVNSYVGEEIVFSGRFDMYRSKHS

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683
- InterPro:   IPR017275
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 21401; Mature: 21401

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEK
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEECHHCCCHHHHHHHHHHHHHH
TLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVA
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEE
VIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRF
EEECCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCH
DMYRSKHS
HHHHCCCC
>Mature Secondary Structure
MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEK
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEECHHCCCHHHHHHHHHHHHHH
TLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVA
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEE
VIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRF
EEECCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCH
DMYRSKHS
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA