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The map label for this gene is ylbO

Identifier: 16078573

GI number: 16078573

Start: 1576129

End: 1576710

Strand: Direct

Name: ylbO

Synonym: BSU15090

Alternate gene names: 16078573

Gene position: 1576129-1576710 (Clockwise)

Preceding gene: 16078572

Following gene: 16078575

Centisome position: 37.39

GC content: 45.19

Gene sequence:

>582_bases
TTGACCATTACAAGACAAGATGCTTGGACTCAGGATGAGGATTTGCTGCTGGCAGAAGTGGTGCTTCGTCATATTCGAGA
GGGAGGAACACAGCTTTCAGCCTTTGAGGAGGTTGGAAGGGCGCTGACCAGAACCGCGGCAGCCTGTGGTTTCAGGTGGA
ACTCGTATGTGAGAAAACAATACCAGTCAGGTATAGAGCTTGCAAAAAAGCAAAGGAAAGAACTGAGAAAGCAAATCGGC
GTTCATTCGGTCAATATGCCGAATTCCATGAAGCAGACTGCCTCGGCATCGTCAGAAGGAAAACGAGATTTGTCCATTCA
GGATGTCATTCAATTTCTCGAACAATTCAAAGAAACACCGTCTGCACAAGAATTTCAGCTTGAAAGGGAAAAATTGAAGG
AGCAAATCCAATCGCTGCAAAAAGAGCTTGAGGATTTGCGGAGTGAAAATCAGACATTGCGGAATCAGCTAGAGATGACA
GAAGAGGATTACAAGGCACTGATCGATATCATGGATCGGGCCAGAAAAATGGTTGTTTCGAAGGAAGACGGAAGAATGAA
AAAAGCGGCTCAAGAAACGTAA

Upstream 100 bases:

>100_bases
TCCTGTCAGCTTGCGGAAAATTTGTGAGTGCAAATAGTCTATCTAATCTATTACCGGCATATGTATGAGATAAATAAGCT
GACATGGAGGGAGATTGAAT

Downstream 100 bases:

>100_bases
AGAAACGCCTGAAATGAACCGGCCCTATAGTAAGAATAGGCCGGTTGTTTTGATTTCTATGCAGACTCTCCCGGTGTCAT
TTCGCGATCCATATCAGGAT

Product: spore coat protein regulator protein YlbO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACGFRWNSYVRKQYQSGIELAKKQRKELRKQIG
VHSVNMPNSMKQTASASSEGKRDLSIQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMT
EEDYKALIDIMDRARKMVVSKEDGRMKKAAQET

Sequences:

>Translated_193_residues
MTITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACGFRWNSYVRKQYQSGIELAKKQRKELRKQIG
VHSVNMPNSMKQTASASSEGKRDLSIQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMT
EEDYKALIDIMDRARKMVVSKEDGRMKKAAQET
>Mature_192_residues
TITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACGFRWNSYVRKQYQSGIELAKKQRKELRKQIGV
HSVNMPNSMKQTASASSEGKRDLSIQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTE
EDYKALIDIMDRARKMVVSKEDGRMKKAAQET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH myb-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLBO_BACSU (O34549)

Other databases:

- EMBL:   Z98682
- EMBL:   AL009126
- PIR:   D69875
- RefSeq:   NP_389392.1
- ProteinModelPortal:   O34549
- EnsemblBacteria:   EBBACT00000003934
- GeneID:   935998
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU15090
- NMPDR:   fig|224308.1.peg.1511
- GenoList:   BSU15090
- GeneTree:   EBGT00050000001550
- HOGENOM:   HBG340913
- OMA:   NNARSNE
- ProtClustDB:   PRK13923
- BioCyc:   BSUB:BSU15090-MONOMER
- InterPro:   IPR014243
- InterPro:   IPR012287
- InterPro:   IPR017930
- InterPro:   IPR001005
- Gene3D:   G3DSA:1.10.10.60
- SMART:   SM00717
- TIGRFAMs:   TIGR02894

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22367; Mature: 22235

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS51294 HTH_MYB; PS00037 MYB_1 ; PS50090 MYB_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACGFRWNSYVRKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQSGIELAKKQRKELRKQIGVHSVNMPNSMKQTASASSEGKRDLSIQDVIQFLEQFKETP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
SAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYKALIDIMDRARKMVVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEDGRMKKAAQET
CCCHHHHHHHCCC
>Mature Secondary Structure 
TITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACGFRWNSYVRKQ
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQSGIELAKKQRKELRKQIGVHSVNMPNSMKQTASASSEGKRDLSIQDVIQFLEQFKETP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
SAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYKALIDIMDRARKMVVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KEDGRMKKAAQET
CCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377