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The map label for this gene is yktD

Identifier: 16078533

GI number: 16078533

Start: 1538770

End: 1539684

Strand: Reverse

Name: yktD

Synonym: BSU14690

Alternate gene names: 16078533

Gene position: 1539684-1538770 (Counterclockwise)

Preceding gene: 16078534

Following gene: 16078529

Centisome position: 36.52

GC content: 38.47

Gene sequence:

>915_bases
ATGAGGAAAAATGAGTCCAGCTTAACGTCTCTAATTTCAGCTTTTGCCCGTGCATATCACAGCCGATATGACACACCTCT
TATTTTTGATGATTTTATCGCAAAAGATCTCATTAACGAAAAAGAGTTTATCGACATCAGTAAAAATATGATTCAAGAAA
TATCGTTTTTCAACAAAGAGATCGCCGAACGTCTTCAAAATGATCCTGAAAAAATATTAAAATGGGTTGCACAAATCCAG
CTGTCTCCAACGCCCCTAGCACGTGCTTCTTATTGTGAAAAAGTCTTGCACAACGAATTAATCCTGGGGGCAAAACAGTA
TGTCATTCTTGGAGCGGGACTGGATACTTTCTGCTTTCGGCATCCAGAATTAGAAAACAGCTTACAGGTTTTCGAGGTTG
ATCATCCGGCCACACAGCAATTGAAAAAAAATAAGCTGAAGGATGCAAATCTGACAATTCCGGGTCATCTTCATTTTGTT
CCTATGGATTTCACCAAAACGTTTTCGTATGATCCTCTCTTAGATGAAGGATTTAAAAACACAAAAACATTCTTCAGCCT
TCTCGGAGTGTCTTATTATGTAACACGGGAAGAAAATGCAAGCTTGATCAGCAATTTATTTTCTCATGTCCCGCCTGGAA
GCTCTATTGTTTTTGATTATGCGGACGAAACACTTTTTACAGCAAAAGGGACGTCGAATCGAGTTGAACATATGGTGAAG
ATGGCTGCCGCAAGCGGGGAACCGATGAAATCATGTTTCACTTATCAAGAGATTGAACATCTGTTAGAGTCATCTGGTTT
ACTGATCTATGAACATCTATCACCAGACGACATCAATGACCTTTTCTTTAGTAATCGAAAAGACAATTTGTCAGCGTTTG
AAACGATTCATTATATTCATGCGGTAAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAAAATTTATTTATGCTAAAATTTACTATTAATATATTTGTATGTATAATAAGATTCTCCTGGCCAGGGGAATCTTAT
TTTTTGTGGAGGATCATTTC

Downstream 100 bases:

>100_bases
TTTTCAAATCATCAGAAGCCTCTCAATGTTTGAGAGGCTTTTTATTGAACCCGCATGCAGCAAATAAGCTGCCATTATCA
TACGGCAGCTTCTGCTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNMIQEISFFNKEIAERLQNDPEKILKWVAQIQ
LSPTPLARASYCEKVLHNELILGAKQYVILGAGLDTFCFRHPELENSLQVFEVDHPATQQLKKNKLKDANLTIPGHLHFV
PMDFTKTFSYDPLLDEGFKNTKTFFSLLGVSYYVTREENASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVK
MAAASGEPMKSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYIHAVKK

Sequences:

>Translated_304_residues
MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNMIQEISFFNKEIAERLQNDPEKILKWVAQIQ
LSPTPLARASYCEKVLHNELILGAKQYVILGAGLDTFCFRHPELENSLQVFEVDHPATQQLKKNKLKDANLTIPGHLHFV
PMDFTKTFSYDPLLDEGFKNTKTFFSLLGVSYYVTREENASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVK
MAAASGEPMKSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYIHAVKK
>Mature_304_residues
MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNMIQEISFFNKEIAERLQNDPEKILKWVAQIQ
LSPTPLARASYCEKVLHNELILGAKQYVILGAGLDTFCFRHPELENSLQVFEVDHPATQQLKKNKLKDANLTIPGHLHFV
PMDFTKTFSYDPLLDEGFKNTKTFFSLLGVSYYVTREENASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVK
MAAASGEPMKSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYIHAVKK

Specific function: May be involved in polyketide synthesis

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKTD_BACSU (Q45500)

Other databases:

- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   F69864
- RefSeq:   NP_389352.1
- ProteinModelPortal:   Q45500
- EnsemblBacteria:   EBBACT00000002753
- GeneID:   935978
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14690
- NMPDR:   fig|224308.1.peg.1471
- GenoList:   BSU14690
- GeneTree:   EBGT00050000004030
- HOGENOM:   HBG690271
- OMA:   FISMDFT
- ProtClustDB:   CLSK887249
- BioCyc:   BSUB:BSU14690-MONOMER
- InterPro:   IPR011610
- InterPro:   IPR007213
- TIGRFAMs:   TIGR00027

Pfam domain/function: PF04072 LCM

EC number: NA

Molecular weight: Translated: 34761; Mature: 34761

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: BINDING 134-134

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNMIQEISFFNKE
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IAERLQNDPEKILKWVAQIQLSPTPLARASYCEKVLHNELILGAKQYVILGAGLDTFCFR
HHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHC
HPELENSLQVFEVDHPATQQLKKNKLKDANLTIPGHLHFVPMDFTKTFSYDPLLDEGFKN
CCCCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCEEEEEECCHHHCCCCCCCHHHCCHH
TKTFFSLLGVSYYVTREENASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVK
HHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHH
MAAASGEPMKSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYIH
HHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHH
AVKK
HHCC
>Mature Secondary Structure
MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNMIQEISFFNKE
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IAERLQNDPEKILKWVAQIQLSPTPLARASYCEKVLHNELILGAKQYVILGAGLDTFCFR
HHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHC
HPELENSLQVFEVDHPATQQLKKNKLKDANLTIPGHLHFVPMDFTKTFSYDPLLDEGFKN
CCCCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCEEEEEECCHHHCCCCCCCHHHCCHH
TKTFFSLLGVSYYVTREENASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVK
HHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHH
MAAASGEPMKSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYIH
HHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHH
AVKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377