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The map label for this gene is abh

Identifier: 16078512

GI number: 16078512

Start: 1517865

End: 1518143

Strand: Direct

Name: abh

Synonym: BSU14480

Alternate gene names: 16078512

Gene position: 1517865-1518143 (Clockwise)

Preceding gene: 16078508

Following gene: 16078513

Centisome position: 36.01

GC content: 38.35

Gene sequence:

>279_bases
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Upstream 100 bases:

>100_bases
GCGGGAAACTTTTTCAAAGTTTCATTCGTCTACGATATATTGAGGTACATCCTTAAAACATTACATGAGAAAAGAAACAT
TTAAAGGAAGAAGGGTTTTT

Downstream 100 bases:

>100_bases
AATTATGCTAAAAAAGGCGGAGTGATATCATCTCCGCCTTTTTTGCGTGCCAATTTTTGATTACCGCCGCCTAAGATAAG
ACATCAAGATATTTGGTAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Sequences:

>Translated_92_residues
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE
>Mature_92_residues
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Specific function: Unknown

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and SpoVT

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ABH_BACSU (P39758)

Other databases:

- EMBL:   D37798
- EMBL:   D37799
- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   I39925
- RefSeq:   NP_389331.1
- PDB:   2FY9
- PDB:   2RO3
- PDBsum:   2FY9
- PDBsum:   2RO3
- ProteinModelPortal:   P39758
- SMR:   P39758
- DIP:   DIP-46334N
- EnsemblBacteria:   EBBACT00000001640
- GeneID:   938738
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14480
- NMPDR:   fig|224308.1.peg.1450
- GenoList:   BSU14480
- GeneTree:   EBGT00070000031935
- HOGENOM:   HBG305668
- OMA:   DSIEFFV
- ProtClustDB:   CLSK887238
- BioCyc:   BSUB:BSU14480-MONOMER
- GO:   GO:0006350
- InterPro:   IPR006339
- InterPro:   IPR007159
- SMART:   SM00966
- TIGRFAMs:   TIGR01439

Pfam domain/function: PF04014 SpoVT_AbrB

EC number: NA

Molecular weight: Translated: 10256; Mature: 10256

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEI
CCCCHHHHHHHHCCCEECCEEHHHHHCCCEECCEEEEECCCEEEEEECCCCCEEEEECCC
TSENKEYGNGKITLSPEGAQLLLEEIQAALKE
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEI
CCCCHHHHHHHHCCCEECCEEHHHHHCCCEECCEEEEECCCEEEEEECCCCCEEEEECCC
TSENKEYGNGKITLSPEGAQLLLEEIQAALKE
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002615; 8969500; 9384377