Click here to switch to the map view.

The map label for this gene is splA

Identifier: 16078456

GI number: 16078456

Start: 1461453

End: 1461692

Strand: Direct

Name: splA

Synonym: BSU13920

Alternate gene names: 16078456

Gene position: 1461453-1461692 (Clockwise)

Preceding gene: 50812224

Following gene: 16078457

Centisome position: 34.67

GC content: 41.67

Gene sequence:

>240_bases
ATGTCAAACCAATTTAACGCAGGAGATACTGTTTATGTGATCTACAGAAATCCGCACGCCGCCAATGTAGCCCACATAAA
GGAAGCCGAAATTGTGCACCATCCATACCATGAAGGCGAGCTTTCCCTGTTTATTTATGAAACCTATCATCCATTCGCAG
AGGACGATGCTGTGTTTGCAAGCTATGAAGAAGCTAAATCGCTTTACAAAGAACTGTTTGATATTGATCCGTATGAGTAA

Upstream 100 bases:

>100_bases
ATTCAAGTAATGTACAAAAACCAGACGGCCTCCGGCCTGTCTGGTTTTTTTCATAAGTAAGGGTATAGAAGGACACAATA
ACATGGCTAGGAGGGATAGT

Downstream 100 bases:

>100_bases
CAAGGAAATCATTACAACTCATATCCTTTCCGCCTAGTGAGAAAAGTAACGTTAGTAAAGGAAAAGGATGTGGCATCATG
CAGAACCCATTTGTTCCGCA

Product: TRAP-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETYHPFAEDDAVFASYEEAKSLYKELFDIDPYE

Sequences:

>Translated_79_residues
MSNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETYHPFAEDDAVFASYEEAKSLYKELFDIDPYE
>Mature_78_residues
SNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETYHPFAEDDAVFASYEEAKSLYKELFDIDPYE

Specific function: Regulator of the spore photoproduct lyase operon (splAB)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPLA_BACSU (P37955)

Other databases:

- EMBL:   L08809
- EMBL:   AL009126
- EMBL:   M98359
- PIR:   E69709
- RefSeq:   NP_389275.1
- EnsemblBacteria:   EBBACT00000003173
- GeneID:   939728
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13920
- NMPDR:   fig|224308.1.peg.1394
- GenoList:   BSU13920
- GeneTree:   EBGT00050000002480
- HOGENOM:   HBG337958
- OMA:   PHAANVA
- ProtClustDB:   CLSK887207
- BioCyc:   BSUB:BSU13920-MONOMER
- GO:   GO:0006350
- InterPro:   IPR022608

Pfam domain/function: PF11132 SplA

EC number: NA

Molecular weight: Translated: 9212; Mature: 9081

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETYHPFAEDDAVFA
CCCCCCCCCEEEEEEECCCCCCEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEE
SYEEAKSLYKELFDIDPYE
CHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETYHPFAEDDAVFA
CCCCCCCCEEEEEEECCCCCCEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCEEE
SYEEAKSLYKELFDIDPYE
CHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8449881; 9384377; 7686067