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The map label for this gene is ykoT

Identifier: 16078404

GI number: 16078404

Start: 1403479

End: 1404492

Strand: Direct

Name: ykoT

Synonym: BSU13390

Alternate gene names: 16078404

Gene position: 1403479-1404492 (Clockwise)

Preceding gene: 16078403

Following gene: 16078407

Centisome position: 33.29

GC content: 42.9

Gene sequence:

>1014_bases
TTGAAACAGTCACAGCCAGTATTAACCATCGTCGTCCCGTGTTTCAATGAAGAGGAAGTGTTTCAAGAAACAAGCCATCA
GCTGACAGAGGTTGTAGATGATTTAATTGAAGAAAAATTAATTGCTGAAGACAGTAAAATTCTGTTTGTCGATGATGGCA
GCAAAGACCGCACTTGGGCTTTGATTGCTATGGAGAGCATAAGAAACAAGAAGGTTACCGGCTTAAAATTAGCCTGCAAT
GTCGGCCACCAAAAAGCGCTTTTAGCCGGATTGCATAAAGCGAAGAATAGGTCAGACTGCGTCATTTCGATCGATGCTGA
TCTTCAGGACGACATCTCTGTGATCCGGGATTTTATGCTGAAATATCATGAGGGCTGCGAGATCGTTTACGGTGTACGCC
GGAGCAGAAAAACCGATACCTTTTTCAAGCGCACGACCGCGTTAGGGTTTTATCGTCTCATGAATAAACTTGGGATTAAA
TTAATTTATAATCATGCTGATTTTCGTTTAATGAATAAAAGGTCCCTTGAAGAGCTTGAGCGTTATCCGGAAGCGAATCT
GTTTTTAAGAGGTATTGTCCCCATGATCGGCTTTAAATCGGCCGAAGTTTTGTATGACCGCAAGGAACGCTTTGCCGGCA
AAACGAAATATCCGCTGAAAAAGATGCTATCCTTCGCTTTTAACGGGATTACTTCATTCAGTGTCGCACCAATTCGATTC
TTTACGCTTTTAGGGTTTGTTTTGTTTTTCCTCAGCGCTGTGGCAGGGATTGGCGCGTTTATTCAAAAGCTGCTCGGCCA
TACGAATGCAGGCTGGGCGTCTCTTATCATATCCATTTGGTTTTTGGGCGGGCTGCAATTGATGGGAATTGGAATCATCG
GAGAGTATATTGGAACGATTTTTTCTGAAGTGAAAAGACGGCCGAAATACGCGATTGATATTGATTTGTATAATGAACAG
CTGAGCCCGCTTCAGCGCCAGGAAAAAGAGCGGTTAGAAAAAAAGTACAGTTAA

Upstream 100 bases:

>100_bases
GAATGCTGAACAAAACCATCTCGCGCTCGTAAAGACGTTTGACCATAAAGATTCCGCCTGGCGCATTTATTTATATGAAA
CAAGATAAGGAGGATATCGA

Downstream 100 bases:

>100_bases
ACACGGAAAGAGCTGACTTCATTAGTCAGCTCTTTTTCTTCAACTGATGCAATATAGCGCTAAGCGGTTCGTCTTGCGGG
TTGCGGTAAAAATCAAAAAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWALIAMESIRNKKVTGLKLACN
VGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFMLKYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIK
LIYNHADFRLMNKRSLEELERYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRF
FTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTIFSEVKRRPKYAIDIDLYNEQ
LSPLQRQEKERLEKKYS

Sequences:

>Translated_337_residues
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWALIAMESIRNKKVTGLKLACN
VGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFMLKYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIK
LIYNHADFRLMNKRSLEELERYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRF
FTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTIFSEVKRRPKYAIDIDLYNEQ
LSPLQRQEKERLEKKYS
>Mature_337_residues
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWALIAMESIRNKKVTGLKLACN
VGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFMLKYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIK
LIYNHADFRLMNKRSLEELERYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRF
FTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTIFSEVKRRPKYAIDIDLYNEQ
LSPLQRQEKERLEKKYS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1788692, Length=310, Percent_Identity=40, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1788588, Length=321, Percent_Identity=25.5451713395639, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOT_BACSU (O34755)

Other databases:

- EMBL:   AL009126
- PIR:   F69860
- RefSeq:   NP_389222.1
- ProteinModelPortal:   O34755
- EnsemblBacteria:   EBBACT00000001293
- GeneID:   939378
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13390
- NMPDR:   fig|224308.1.peg.1341
- GenoList:   BSU13390
- GeneTree:   EBGT00050000000544
- HOGENOM:   HBG752660
- OMA:   FNHADYR
- ProtClustDB:   CLSK2460910
- BioCyc:   BSUB:BSU13390-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38515; Mature: 38515

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc689444)-; HASH(0xd2fec08)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWA
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEE
LIAMESIRNKKVTGLKLACNVGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFML
EEEHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH
KYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIKLIYNHADFRLMNKRSLEELE
HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHH
RYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRF
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
FTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSEVKRRPKYAIDIDLYNEQLSPLQRQEKERLEKKYS
HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWA
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEE
LIAMESIRNKKVTGLKLACNVGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFML
EEEHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH
KYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIKLIYNHADFRLMNKRSLEELE
HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHH
RYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRF
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
FTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSEVKRRPKYAIDIDLYNEQLSPLQRQEKERLEKKYS
HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377