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The map label for this gene is ykoS

Identifier: 16078403

GI number: 16078403

Start: 1401772

End: 1403466

Strand: Direct

Name: ykoS

Synonym: BSU13380

Alternate gene names: 16078403

Gene position: 1401772-1403466 (Clockwise)

Preceding gene: 255767315

Following gene: 16078404

Centisome position: 33.25

GC content: 42.01

Gene sequence:

>1695_bases
ATGTTACGATTGATGAGACAACAAAAAAAAGAAACATATTATCTCTGGATCGCATTATTTCTTCTTTTATTGTATGTATC
CCCGCTTTTTATTTTAAAGGAAGATGCCCATATCCGGGTCCACGATAATTTAGATTCCAACATCGCTTGGTACAAGGTTC
TGGCCGATAGCGGAGAAATCGTCGGCAAGGTTGACGCTGCCATTCCGCAAATCATTAACGGGCTGCCCCGGGATGCCTTT
GGCACCGAGTGGAGCGGAATTGTTTGGCTCCATGCTTTCTTTTCTTCCATGACCGCCTATGCAATAAGCCAGACGGTTAC
AAGAGTTGTCGCTTTTTTTGGAATGTATGTGCTGCTGAAGAAACATATAATCCCGGAACCAAAAGCGGCTTTCATCCGAA
TTGGCGTATCGCTTGCATTTGCCTTAACACCGTTCTGGCCTTCGGGAATGCTGAGTACGCTTGGGTACCCTTTGGCACTG
TGGGCTTTTTTAAATATCCGAAAAGGGGATATCTCATGGAGAGAGTGGCTGACGCTGGGCTTGCTCCCTCTATACTCAAG
CTTTGTTCTAGGCTTCTTCTTTTTCCTGGCAGGGATGGCGTGTTTTTGGCTGTATGATGCCATTACAAAAAGAAGATGGA
ATTTGATGTTCTTAGGCAGTATTGCATTTATGACGAGTATCTATCTTTTCGTTGAATATCGGCTTGTCTATTCGATGCTG
TTTGAGCACGCACCGATGCATCGTATCGAATTTATCTCATCTAGGCATGACGTTTGGCATTCTCTTCGACTATCCATAAA
AAACTTTGTCTATGGCCATAATCATGTGATGACCGTTCATACCGTTGTCATCCTTCCGATCCTGATGGTCGTATTTGCTG
CTCTGCTGTTCAAACGAAATCGGACAAAGCCAGAAAATGTTTATCTGTTTTTATGTGTGCTTAATTACGGGTTGTCATTA
TGGTATGCGTTTTGGTTCAACAAAATTTGGGCTGTTCCAAAGCAGAAATTTGCTTTTTTAGCAGAATTTAATTTTGCCCG
TTTTCATTTTCTTCGGCCGCTTGTTATATACGTGAGCTTTGCGCTTGCTTTATATCTCATTTGGCGGATGGGGAAAGGAT
GGAAATGGCTTGTGTACGCCGCAGTCGCTGCACAGCTGATGGTGTTGGCGCCTTTTAATGAAGAATATACGTATGGTGTT
CATTACAACGCGCCGACATTCAGGGAGTTTTATGCATCAGAGCAATTCAAAGAGATTAAGGAATATATCGGACGTCCGCA
AGATTCGTATAGGGTGGCGAGCATCGGACTGCATCCGTCTATCGCCCAATATAACGGGTTTTATACGTTAGATACGTATA
ACAATCTGTATCCGCTCTCATATAAATATGAATTTAGAAAAATCATCGAAAAAGAGCTGGAAAAAAATTCTCGGCTGAAA
CAATACTTTGATGAATGGGGCAGCCGCTGCTACCTTTTTGTCGATGAACTCGGTAAACGATATGATTTCAAAAAGAACTC
GAAGAAAACGATCAACAACCTTCAATTAAATACAGATGTATTTAAAAAAATGGGTGGACGGTACATTTTTTCTTCAGTTC
CGATCATGAATGCTGAACAAAACCATCTCGCGCTCGTAAAGACGTTTGACCATAAAGATTCCGCCTGGCGCATTTATTTA
TATGAAACAAGATAA

Upstream 100 bases:

>100_bases
TCATATGATGAATGATTTGGAAGGGAAAAGGGATAATAAATTTTGACACATGAGGCAGAACATGCCGACGGAGTCAGAAT
AACAAATGGATGTGTAAGCA

Downstream 100 bases:

>100_bases
GGAGGATATCGATTGAAACAGTCACAGCCAGTATTAACCATCGTCGTCCCGTGTTTCAATGAAGAGGAAGTGTTTCAAGA
AACAAGCCATCAGCTGACAG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAWYKVLADSGEIVGKVDAAIPQIINGLPRDAF
GTEWSGIVWLHAFFSSMTAYAISQTVTRVVAFFGMYVLLKKHIIPEPKAAFIRIGVSLAFALTPFWPSGMLSTLGYPLAL
WAFLNIRKGDISWREWLTLGLLPLYSSFVLGFFFFLAGMACFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSML
FEHAPMHRIEFISSRHDVWHSLRLSIKNFVYGHNHVMTVHTVVILPILMVVFAALLFKRNRTKPENVYLFLCVLNYGLSL
WYAFWFNKIWAVPKQKFAFLAEFNFARFHFLRPLVIYVSFALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTYGV
HYNAPTFREFYASEQFKEIKEYIGRPQDSYRVASIGLHPSIAQYNGFYTLDTYNNLYPLSYKYEFRKIIEKELEKNSRLK
QYFDEWGSRCYLFVDELGKRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQNHLALVKTFDHKDSAWRIYL
YETR

Sequences:

>Translated_564_residues
MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAWYKVLADSGEIVGKVDAAIPQIINGLPRDAF
GTEWSGIVWLHAFFSSMTAYAISQTVTRVVAFFGMYVLLKKHIIPEPKAAFIRIGVSLAFALTPFWPSGMLSTLGYPLAL
WAFLNIRKGDISWREWLTLGLLPLYSSFVLGFFFFLAGMACFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSML
FEHAPMHRIEFISSRHDVWHSLRLSIKNFVYGHNHVMTVHTVVILPILMVVFAALLFKRNRTKPENVYLFLCVLNYGLSL
WYAFWFNKIWAVPKQKFAFLAEFNFARFHFLRPLVIYVSFALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTYGV
HYNAPTFREFYASEQFKEIKEYIGRPQDSYRVASIGLHPSIAQYNGFYTLDTYNNLYPLSYKYEFRKIIEKELEKNSRLK
QYFDEWGSRCYLFVDELGKRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQNHLALVKTFDHKDSAWRIYL
YETR
>Mature_564_residues
MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAWYKVLADSGEIVGKVDAAIPQIINGLPRDAF
GTEWSGIVWLHAFFSSMTAYAISQTVTRVVAFFGMYVLLKKHIIPEPKAAFIRIGVSLAFALTPFWPSGMLSTLGYPLAL
WAFLNIRKGDISWREWLTLGLLPLYSSFVLGFFFFLAGMACFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSML
FEHAPMHRIEFISSRHDVWHSLRLSIKNFVYGHNHVMTVHTVVILPILMVVFAALLFKRNRTKPENVYLFLCVLNYGLSL
WYAFWFNKIWAVPKQKFAFLAEFNFARFHFLRPLVIYVSFALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTYGV
HYNAPTFREFYASEQFKEIKEYIGRPQDSYRVASIGLHPSIAQYNGFYTLDTYNNLYPLSYKYEFRKIIEKELEKNSRLK
QYFDEWGSRCYLFVDELGKRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQNHLALVKTFDHKDSAWRIYL
YETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOS_BACSU (O34830)

Other databases:

- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   E69860
- RefSeq:   NP_389221.1
- ProteinModelPortal:   O34830
- EnsemblBacteria:   EBBACT00000002970
- GeneID:   939380
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13380
- NMPDR:   fig|224308.1.peg.1340
- GenoList:   BSU13380
- GeneTree:   EBGT00050000005087
- HOGENOM:   HBG313697
- OMA:   AVPIDNA
- ProtClustDB:   CLSK887183
- BioCyc:   BSUB:BSU13380-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66505; Mature: 66505

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xeb1bf98)-; HASH(0xce39f74)-; HASH(0xe9684a4)-; HASH(0xe4681dc)-; HASH(0xea5d60c)-; HASH(0xb35a84c)-; HASH(0xe2e2efc)-; HASH(0xedbf31c)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAWYKVLADSGEI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCEEEEEEECCCCC
VGKVDAAIPQIINGLPRDAFGTEWSGIVWLHAFFSSMTAYAISQTVTRVVAFFGMYVLLK
EEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHIIPEPKAAFIRIGVSLAFALTPFWPSGMLSTLGYPLALWAFLNIRKGDISWREWLTLG
HHCCCCCCHHHHEEHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
LLPLYSSFVLGFFFFLAGMACFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
FEHAPMHRIEFISSRHDVWHSLRLSIKNFVYGHNHVMTVHTVVILPILMVVFAALLFKRN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RTKPENVYLFLCVLNYGLSLWYAFWFNKIWAVPKQKFAFLAEFNFARFHFLRPLVIYVSF
CCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTYGVHYNAPTFREFYASEQFKEIK
HHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
EYIGRPQDSYRVASIGLHPSIAQYNGFYTLDTYNNLYPLSYKYEFRKIIEKELEKNSRLK
HHHCCCCCCCEEEEECCCCCHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHH
QYFDEWGSRCYLFVDELGKRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQ
HHHHHHCCEEEEEHHHHCCCCCCCCCCCHHHHHEEECHHHHHHCCCEEEEECCCCCCCCC
NHLALVKTFDHKDSAWRIYLYETR
CCEEEEEEECCCCCEEEEEEEECH
>Mature Secondary Structure
MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAWYKVLADSGEI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCEEEEEEECCCCC
VGKVDAAIPQIINGLPRDAFGTEWSGIVWLHAFFSSMTAYAISQTVTRVVAFFGMYVLLK
EEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHIIPEPKAAFIRIGVSLAFALTPFWPSGMLSTLGYPLALWAFLNIRKGDISWREWLTLG
HHCCCCCCHHHHEEHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
LLPLYSSFVLGFFFFLAGMACFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
FEHAPMHRIEFISSRHDVWHSLRLSIKNFVYGHNHVMTVHTVVILPILMVVFAALLFKRN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RTKPENVYLFLCVLNYGLSLWYAFWFNKIWAVPKQKFAFLAEFNFARFHFLRPLVIYVSF
CCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTYGVHYNAPTFREFYASEQFKEIK
HHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
EYIGRPQDSYRVASIGLHPSIAQYNGFYTLDTYNNLYPLSYKYEFRKIIEKELEKNSRLK
HHHCCCCCCCEEEEECCCCCHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHH
QYFDEWGSRCYLFVDELGKRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQ
HHHHHHCCEEEEEHHHHCCCCCCCCCCCHHHHHEEECHHHHHHCCCEEEEECCCCCCCCC
NHLALVKTFDHKDSAWRIYLYETR
CCEEEEEEECCCCCEEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377