Click here to switch to the map view.

The map label for this gene is ykoQ

Identifier: 16078402

GI number: 16078402

Start: 1400767

End: 1401579

Strand: Reverse

Name: ykoQ

Synonym: BSU13370

Alternate gene names: 16078402

Gene position: 1401579-1400767 (Counterclockwise)

Preceding gene: 16078405

Following gene: 255767314

Centisome position: 33.25

GC content: 40.84

Gene sequence:

>813_bases
TTGTTTACAATCTTACTTTCATTGGCCATACTCGTATTTGTGCCATTTCTATATAAAGCGAACCGCAATACAAAAGATGT
GAAAGTCAACACCATTTCAATCGACCAAAAAGACGGCCTTCCAGCCAGAAAAAAATTAAATATCCTTCATTTATCTGATC
TTCACTTGGAAAACATTTCAGTCTCACCTGAGGAGCTGTATCATTTAACAAAAGATCAGCCTGTGGACATCATTGCTCTT
ACCGGGGATTTTCTTGATCGGAAACGTAATATTCCGAAACTGGCAGGTTACTTGAACGCCTTGCAAAAGCTAAAGCCTGC
ATATGGAATGTACGCGGTGTTCGGTAACCACGATTATGTATTGAAAGAAGAGGACTTTCAGAGATTGAAGCGAGTTTTAG
AGGAAAACGGCTGTATCACGCTGCAAAATGAACATGTTCGAATCGAGACGGCTGCAGGACCAGTCAATATTATCGGCATT
GATGATTACAGTACGAATCGGAGTAATATCACCGGCTCTTATCAAAGTCTGGAAAATGGCTATCATCTTGTCTTAACACA
TGACCCAAATATTATTCTGGATATGAAAGATGTTCATTATGATTACCTGCTGTCAGGGCATTTTCACGGCGGGCAAATTC
ACTGGCCAAAACCGTATCATTTGGTGAAAATGGGAAAGCTCGTGCGAATGAACATGATTAAAGGCCTTCATTATCATCAC
GATAAACCATTTTATATCAGCGAGGGCTTGGGACAAACCGGCGTAAATATCCGTGTCGGAAGCCGCCCTGAAGTGACATT
TCATCAGATTTAA

Upstream 100 bases:

>100_bases
TCATATGACAATCCGTTTTTCAACCTGTCTCTACCCATTAATTCCCGCTATCCATAGGGCTTGATCACTTACTATACTGA
TAGAAGGGAGGGGATATATT

Downstream 100 bases:

>100_bases
TCAAAAAAGACTGTGCTGACCGAGGCATCAGTCTTTTTTTTGATAGGTTTTCTGCAGCTTTTCTTTTGAGATAAACAAAT
AGGATGAATTCGGTAAATGC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENISVSPEELYHLTKDQPVDIIAL
TGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYVLKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGI
DDYSTNRSNITGSYQSLENGYHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGVNIRVGSRPEVTFHQI

Sequences:

>Translated_270_residues
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENISVSPEELYHLTKDQPVDIIAL
TGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYVLKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGI
DDYSTNRSNITGSYQSLENGYHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGVNIRVGSRPEVTFHQI
>Mature_270_residues
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENISVSPEELYHLTKDQPVDIIAL
TGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYVLKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGI
DDYSTNRSNITGSYQSLENGYHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGVNIRVGSRPEVTFHQI

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily

Homologues:

Organism=Escherichia coli, GI87081695, Length=233, Percent_Identity=27.8969957081545, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOQ_BACSU (O35040)

Other databases:

- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   D69860
- RefSeq:   NP_389220.1
- ProteinModelPortal:   O35040
- SMR:   O35040
- EnsemblBacteria:   EBBACT00000003701
- GeneID:   939388
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU13370
- NMPDR:   fig|224308.1.peg.1339
- GenoList:   BSU13370
- GeneTree:   EBGT00050000001075
- HOGENOM:   HBG343253
- OMA:   GMYAVFG
- ProtClustDB:   CLSK887182
- BioCyc:   BSUB:BSU13370-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30877; Mature: 30877

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENIS
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHEEEEEEEECCEECCCC
VSPEELYHLTKDQPVDIIALTGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYV
CCHHHHHCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE
LKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGIDDYSTNRSNITGSYQSLENG
ECHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCC
YHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
EEEEEEECCCEEEEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHCCC
DKPFYISEGLGQTGVNIRVGSRPEVTFHQI
CCCEEEECCCCCCCCEEEECCCCCEEEECC
>Mature Secondary Structure
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENIS
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHEEEEEEEECCEECCCC
VSPEELYHLTKDQPVDIIALTGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYV
CCHHHHHCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE
LKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGIDDYSTNRSNITGSYQSLENG
ECHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCC
YHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
EEEEEEECCCEEEEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCHHCCC
DKPFYISEGLGQTGVNIRVGSRPEVTFHQI
CCCEEEECCCCCCCCEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377