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The map label for this gene is ykaA

Identifier: 16078350

GI number: 16078350

Start: 1350482

End: 1351099

Strand: Reverse

Name: ykaA

Synonym: BSU12850

Alternate gene names: 16078350

Gene position: 1351099-1350482 (Counterclockwise)

Preceding gene: 16078351

Following gene: 255767297

Centisome position: 32.05

GC content: 35.92

Gene sequence:

>618_bases
ATGATAAGAAGAAAAAAAGATAAGTTCTCACTCCTTTTAACAGAAATTGCAAAGAACATAGACGAAACTGCAGAATATTT
TGTGAATTTTAAGGTCACTAACCAAACGACTCTTAAAGAATTTGCAGATACGTTAAAGGAATATGAAACAAAAGGTGACA
ATCATGTTCATGTCATGATTAAAGAGCTTAACAAAGCGTTCATCACTCCTATTGAGCGCGAAGATATCCTTCAGCTGACA
AACAGCTTGGATGATGTGCTTGACGGAATCGAACATTTCTCTGCCATGATGGAGATTTTCTCAATTACTTCATCAGACGA
GCATATTGATAAATTCAGCGGATATATCAGAGAATGTGCGAAAGAGATTTTGATTACGATCGAGCTGCTGGCAGAAAATC
GCTTAAAGGATATTCAGCCTCACGCAATCAAAATTAAAGAGTATGAGCACAGTTGTGACAACTTGCACAGAAAATCATTA
AAGAATCTTTTCGGAAATGAAACAGATCCAATCAAAGTCATTCAATATCGTGAAATATACGAAACGCTTGAAGAAATCGC
CGACTCTTGTCAAAGTGTTGCCAATAATCTTGAAACCATCATTATGAAAAACGCGTAA

Upstream 100 bases:

>100_bases
TCAAGATACGTTTTTTTCGACTTTACCTGTTTTTTTTCGACAAAAGGCTATATAATAATTTGATGTGTGCATTGTTCATT
CAAACTATGGAGGGTTTTTA

Downstream 100 bases:

>100_bases
CGAGGGGTAAAAATGGATATTCTATTAATATTAACGATACTAATAGTCATTTGTGCTCTGGCGTTTGATTTCATCAACGG
GTTTCATGATACGGCAAACG

Product: Pit accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIRRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMIKELNKAFITPIEREDILQLT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSL
KNLFGNETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA

Sequences:

>Translated_205_residues
MIRRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMIKELNKAFITPIEREDILQLT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSL
KNLFGNETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA
>Mature_205_residues
MIRRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMIKELNKAFITPIEREDILQLT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSL
KNLFGNETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKAA_BACSU (O34454)

Other databases:

- EMBL:   AJ002571
- EMBL:   AL009126
- PIR:   H69854
- RefSeq:   NP_389168.1
- ProteinModelPortal:   O34454
- SMR:   O34454
- EnsemblBacteria:   EBBACT00000001075
- GeneID:   939843
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12850
- NMPDR:   fig|224308.1.peg.1287
- GenoList:   BSU12850
- GeneTree:   EBGT00050000001577
- HOGENOM:   HBG512336
- OMA:   DAIDQMQ
- ProtClustDB:   CLSK2301455
- BioCyc:   BSUB:BSU12850-MONOMER
- InterPro:   IPR012347
- InterPro:   IPR018445
- Gene3D:   G3DSA:1.20.1260.10

Pfam domain/function: PF01865 PhoU_div

EC number: NA

Molecular weight: Translated: 23844; Mature: 23844

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEHHH
KELNKAFITPIEREDILQLTNSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KEILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSLKNLFGNETDPIKVIQYREIY
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ETLEEIADSCQSVANNLETIIMKNA
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEYETKGDNHVHVMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEHHH
KELNKAFITPIEREDILQLTNSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KEILITIELLAENRLKDIQPHAIKIKEYEHSCDNLHRKSLKNLFGNETDPIKVIQYREIY
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ETLEEIADSCQSVANNLETIIMKNA
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377