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The map label for this gene is xkdS

Identifier: 16078337

GI number: 16078337

Start: 1340932

End: 1341357

Strand: Direct

Name: xkdS

Synonym: BSU12720

Alternate gene names: 16078337

Gene position: 1340932-1341357 (Clockwise)

Preceding gene: 16078336

Following gene: 16078338

Centisome position: 31.81

GC content: 44.6

Gene sequence:

>426_bases
ATGGCCCTGACACCAGAAGTGGAGTTTGAAGATATTGAAGTTGAGAGCGAAGTCATTGAAACCTCGCAAACGTACAAAAT
AGATTTTGAAAACGGAAGAATTACGAATGAGCTGATTACCGGGCTTGAAGCGATCAGGCAGTTCGTGTATATCGCCTTAC
AGACAGAACGCTATGCATATTCCATATACAGCCATAATGTCGGAAACGAGCTTCAGGACGTGCTGACAGATCATGAGACG
ACTGATGCGTATAAAAAGATGGAGATTCCGAGACTGATAGAAGAGGCGCTGGTTTATGATGACCGGATATCTGCTGTAAC
AGATTTTGAGATTGAAAAACAAGGCGACGCGTTTCATGTGTCCTTCGTGGTGGAGACGGATGAAGGAACGCTTGAGATTG
AGGAGGTGATTGGCGAAGATGTTTGA

Upstream 100 bases:

>100_bases
CTCTGACTGGCGGGCAATCGTTTTTTATTTTAGATAAGGTATAGACAAACCGCTTCAGTACGAAGGGGTTTTTATTTAGC
ATGTAAAAGGAGTGGGCAAC

Downstream 100 bases:

>100_bases
AGATCAGACTTTTGAAGCGATTATGGAGCGTATGCTGAACAGCATTTCCGCAGATATTGACACAAGAGAAGGCAGCGTCA
TTTATAATGCGTTAGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MALTPEVEFEDIEVESEVIETSQTYKIDFENGRITNELITGLEAIRQFVYIALQTERYAYSIYSHNVGNELQDVLTDHET
TDAYKKMEIPRLIEEALVYDDRISAVTDFEIEKQGDAFHVSFVVETDEGTLEIEEVIGEDV

Sequences:

>Translated_141_residues
MALTPEVEFEDIEVESEVIETSQTYKIDFENGRITNELITGLEAIRQFVYIALQTERYAYSIYSHNVGNELQDVLTDHET
TDAYKKMEIPRLIEEALVYDDRISAVTDFEIEKQGDAFHVSFVVETDEGTLEIEEVIGEDV
>Mature_140_residues
ALTPEVEFEDIEVESEVIETSQTYKIDFENGRITNELITGLEAIRQFVYIALQTERYAYSIYSHNVGNELQDVLTDHETT
DAYKKMEIPRLIEEALVYDDRISAVTDFEIEKQGDAFHVSFVVETDEGTLEIEEVIGEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbS

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDS_BACSU (P54338)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   B69733
- RefSeq:   NP_389154.1
- ProteinModelPortal:   P54338
- EnsemblBacteria:   EBBACT00000001468
- GeneID:   939840
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12720
- NMPDR:   fig|224308.1.peg.1273
- GenoList:   BSU12720
- GeneTree:   EBGT00050000006459
- HOGENOM:   HBG419097
- OMA:   LRTERYA
- ProtClustDB:   CLSK887135
- BioCyc:   BSUB:BSU12720-MONOMER
- InterPro:   IPR020288
- ProDom:   PD033094

Pfam domain/function: PF10934 DUF2634

EC number: NA

Molecular weight: Translated: 16205; Mature: 16074

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTPEVEFEDIEVESEVIETSQTYKIDFENGRITNELITGLEAIRQFVYIALQTERYAY
CCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHEEECCCEEE
SIYSHNVGNELQDVLTDHETTDAYKKMEIPRLIEEALVYDDRISAVTDFEIEKQGDAFHV
EEECCCCCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEECEEEECCCCEEEE
SFVVETDEGTLEIEEVIGEDV
EEEEECCCCCEEHHHHCCCCC
>Mature Secondary Structure 
ALTPEVEFEDIEVESEVIETSQTYKIDFENGRITNELITGLEAIRQFVYIALQTERYAY
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHEEECCCEEE
SIYSHNVGNELQDVLTDHETTDAYKKMEIPRLIEEALVYDDRISAVTDFEIEKQGDAFHV
EEECCCCCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEECEEEECCCCEEEE
SFVVETDEGTLEIEEVIGEDV
EEEEECCCCCEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377