Click here to switch to the map view.

The map label for this gene is xkdR

Identifier: 16078336

GI number: 16078336

Start: 1340609

End: 1340875

Strand: Direct

Name: xkdR

Synonym: BSU12710

Alternate gene names: 16078336

Gene position: 1340609-1340875 (Clockwise)

Preceding gene: 16078335

Following gene: 16078337

Centisome position: 31.8

GC content: 48.69

Gene sequence:

>267_bases
ATGAGATTAAGTGAGGCTATAAAACATTTGGCAGTCGGCGCAGTTGACGCTGAGTCTCCGGTAGAACTGCTCCCGGCTGA
AGTCGTTTCGGTTTCTCCTGTGGAAATCAAATTAAAAGAAAACAGCAAACTGATCATACCGGAAGACGCCATCATTATCC
CAAAACGAATGCAGTCCGGAGGAGACGATGCACTCGAGCCGGGGGATCGCCTCATGACCGCGGCTCTGACTGGCGGGCAA
TCGTTTTTTATTTTAGATAAGGTATAG

Upstream 100 bases:

>100_bases
CCTATTGGGTAGATACGGACCGGCATGAATTTAAAGGAACGAAACATACGATGACGATCGATGTTGTCGAAAAGAATACG
ATGCCGGAAGGAGTTTCCTG

Downstream 100 bases:

>100_bases
ACAAACCGCTTCAGTACGAAGGGGTTTTTATTTAGCATGTAAAAGGAGTGGGCAACATGGCCCTGACACCAGAAGTGGAG
TTTGAAGATATTGAAGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDAIIIPKRMQSGGDDALEPGDRLMTAALTGGQ
SFFILDKV

Sequences:

>Translated_88_residues
MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDAIIIPKRMQSGGDDALEPGDRLMTAALTGGQ
SFFILDKV
>Mature_88_residues
MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDAIIIPKRMQSGGDDALEPGDRLMTAALTGGQ
SFFILDKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbR

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDR_BACSU (P54337)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   A69733
- RefSeq:   NP_389153.1
- EnsemblBacteria:   EBBACT00000000693
- GeneID:   939427
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12710
- NMPDR:   fig|224308.1.peg.1272
- GenoList:   BSU12710
- GeneTree:   EBGT00050000006599
- HOGENOM:   HBG345193
- OMA:   ITEGFME
- ProtClustDB:   CLSK887134
- BioCyc:   BSUB:BSU12710-MONOMER
- InterPro:   IPR022555
- InterPro:   IPR020283
- ProDom:   PD028957

Pfam domain/function: PF10844 DUF2577

EC number: NA

Molecular weight: Translated: 9381; Mature: 9381

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDAIIIPKRMQSG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEECCCCEEECCCCCEEECCCCCCC
GDDALEPGDRLMTAALTGGQSFFILDKV
CCCCCCCCCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDAIIIPKRMQSG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEECCCCEEECCCCCEEECCCCCCC
GDDALEPGDRLMTAALTGGQSFFILDKV
CCCCCCCCCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377