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The map label for this gene is yjdJ

Identifier: 16078272

GI number: 16078272

Start: 1278565

End: 1278894

Strand: Reverse

Name: yjdJ

Synonym: BSU12070

Alternate gene names: 16078272

Gene position: 1278894-1278565 (Counterclockwise)

Preceding gene: 255767274

Following gene: 255767273

Centisome position: 30.34

GC content: 36.97

Gene sequence:

>330_bases
GTGAAGGGAATATTTTTAGTTGTTCAGCTTGGATTTTCTATTATGGTATTTCTGTTTTTAGCTGCTGTTAATTGGTATCA
AGGAAGCGAGCTTGTTTCAGATCGATTTGATTGGAACTATACTGCTAAACTCTCAAAACTGCTTAATGGAATTGATGCCG
TCAGCAGCCCCAAACAAATTTCACAGCTTGATTTTTTCATCTACTCCGCTAAACACTACCCTGTTATGAGTGCGTTAATG
ATCATCTCCTTCTTATATGTTCTGGCCGCTCTTTTTTTACTTATATACTCAGTCAAATGCAATAAGCAAGAGATTCATTT
GGACTGCTGA

Upstream 100 bases:

>100_bases
GCGTTTGAGTTGTATGGAAGTGAAATTGCAAGAATAACCCATACGGTGGTAATATATTGTTTGATTTTCCCATATTCATA
GATTTGGAGGTCATACAAAA

Downstream 100 bases:

>100_bases
CCCGGTAAAATTCGTTTTTATAGCCCCTTAACTCTTCCCAGATGCATGCAGGCATCAGGCATAAATGGATTTGTTTAGTG
AGTGAAATATACTTTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQISQLDFFIYSAKHYPVMSALM
IISFLYVLAALFLLIYSVKCNKQEIHLDC

Sequences:

>Translated_109_residues
MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQISQLDFFIYSAKHYPVMSALM
IISFLYVLAALFLLIYSVKCNKQEIHLDC
>Mature_109_residues
MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQISQLDFFIYSAKHYPVMSALM
IISFLYVLAALFLLIYSVKCNKQEIHLDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJDJ_BACSU (O31651)

Other databases:

- EMBL:   AL009126
- PIR:   E69849
- RefSeq:   NP_389089.1
- EnsemblBacteria:   EBBACT00000002779
- GeneID:   936449
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12070
- NMPDR:   fig|224308.1.peg.1208
- GenoList:   BSU12070
- GeneTree:   EBGT00050000001437
- HOGENOM:   HBG338592
- OMA:   TSALINW
- ProtClustDB:   CLSK2752375
- BioCyc:   BSUB:BSU12070-MONOMER
- InterPro:   IPR016508
- PIRSF:   PIRSF007103

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12455; Mature: 12455

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe6292cc)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH
SQLDFFIYSAKHYPVMSALMIISFLYVLAALFLLIYSVKCNKQEIHLDC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCH
>Mature Secondary Structure
MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNGIDAVSSPKQI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH
SQLDFFIYSAKHYPVMSALMIISFLYVLAALFLLIYSVKCNKQEIHLDC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377