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The map label for this gene is yjcP

Identifier: 16078259

GI number: 16078259

Start: 1266614

End: 1267117

Strand: Direct

Name: yjcP

Synonym: BSU11940

Alternate gene names: 16078259

Gene position: 1266614-1267117 (Clockwise)

Preceding gene: 16078258

Following gene: 16078260

Centisome position: 30.05

GC content: 29.56

Gene sequence:

>504_bases
ATGAAAAAACAGAAAAATAATAAAAAGAAGAATATTGAAAAGCGAAATATTGAAAAGCGAAATATTGAAGAGAAGAATAA
TGAGGACTTAGAAGAACTGGAAAATGCGATTTATACTTATCACAAAAAGGAGCTACTTGCTTTCTTTCTTGAAAAAACTC
GAATTGGTCATGATAAGGAAGAATACAAAAGGTTCCAATCTCTTCTTTATAAGTTGGATATTGAATGTTTAGAATTTGCT
ATATCGAGATTTTCTCATATAGATATTATCCATGATCATTCAAAATATGTTCCAGCCTTTATCCCTTTATTTGCAGCATA
TCTCACCATGTTCTTTAATTTTTATGAAAAACATTGGGGAGCTTTATCTTTTGCTGCTGGTACAATTGCTGCTATTGTTT
GGATAATTGCAGTAGAAAGAAAACATAGAAATCAAGCAATTTCTATTATGAAAATATTTGAACAAGTCAAAGAGAGAAAA
GTGAAAGACAGATCTAAAGACTGA

Upstream 100 bases:

>100_bases
ACAAAATATGTTTTTTTCAACAGATTCGTTCGACAAATTTTGCAAATTGTTAATCGATAACTTTTCATTCCCGATATTAA
AAATGGGAGTGAATTGTAAA

Downstream 100 bases:

>100_bases
AAGGAGAAAATATGAATAAGGATAAATTAAGGTATGCAATCTTAAAAGAAATTTTTGAAGGTAATACCCCTTTGTCAGAA
AACGATATTGGAGTTACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKQKNNKKKNIEKRNIEKRNIEEKNNEDLEELENAIYTYHKKELLAFFLEKTRIGHDKEEYKRFQSLLYKLDIECLEFA
ISRFSHIDIIHDHSKYVPAFIPLFAAYLTMFFNFYEKHWGALSFAAGTIAAIVWIIAVERKHRNQAISIMKIFEQVKERK
VKDRSKD

Sequences:

>Translated_167_residues
MKKQKNNKKKNIEKRNIEKRNIEEKNNEDLEELENAIYTYHKKELLAFFLEKTRIGHDKEEYKRFQSLLYKLDIECLEFA
ISRFSHIDIIHDHSKYVPAFIPLFAAYLTMFFNFYEKHWGALSFAAGTIAAIVWIIAVERKHRNQAISIMKIFEQVKERK
VKDRSKD
>Mature_167_residues
MKKQKNNKKKNIEKRNIEKRNIEEKNNEDLEELENAIYTYHKKELLAFFLEKTRIGHDKEEYKRFQSLLYKLDIECLEFA
ISRFSHIDIIHDHSKYVPAFIPLFAAYLTMFFNFYEKHWGALSFAAGTIAAIVWIIAVERKHRNQAISIMKIFEQVKERK
VKDRSKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJCP_BACSU (O31638)

Other databases:

- EMBL:   AL009126
- PIR:   H69847
- RefSeq:   NP_389076.1
- ProteinModelPortal:   O31638
- EnsemblBacteria:   EBBACT00000003824
- GeneID:   936429
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11940
- NMPDR:   fig|224308.1.peg.1195
- GenoList:   BSU11940
- GeneTree:   EBGT00050000006672
- HOGENOM:   HBG345039
- OMA:   WIIAVER
- ProtClustDB:   CLSK887084
- BioCyc:   BSUB:BSU11940-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20086; Mature: 20086

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcf703d8)-; HASH(0xe61aee8)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQKNNKKKNIEKRNIEKRNIEEKNNEDLEELENAIYTYHKKELLAFFLEKTRIGHDKE
CCCCCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EYKRFQSLLYKLDIECLEFAISRFSHIDIIHDHSKYVPAFIPLFAAYLTMFFNFYEKHWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSFAAGTIAAIVWIIAVERKHRNQAISIMKIFEQVKERKVKDRSKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MKKQKNNKKKNIEKRNIEKRNIEEKNNEDLEELENAIYTYHKKELLAFFLEKTRIGHDKE
CCCCCCCHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EYKRFQSLLYKLDIECLEFAISRFSHIDIIHDHSKYVPAFIPLFAAYLTMFFNFYEKHWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSFAAGTIAAIVWIIAVERKHRNQAISIMKIFEQVKERKVKDRSKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377