Click here to switch to the map view.

The map label for this gene is yjbE

Identifier: 16078216

GI number: 16078216

Start: 1228135

End: 1228791

Strand: Reverse

Name: yjbE

Synonym: BSU11510

Alternate gene names: 16078216

Gene position: 1228791-1228135 (Counterclockwise)

Preceding gene: 255767261

Following gene: 16078207

Centisome position: 29.15

GC content: 46.42

Gene sequence:

>657_bases
ATGGAGCATGACTATCTGATTTCTCTGCTCGTCATTGTTGGGATTGACCTGATCCTCGGCGGAGATAACGCGGTTGTTAT
TGCCATGGCCAGCAGACATTTGCCGGACAAGCAAAGACAGCAAGCCATTATTCTCGGAACATTTATTGCCGTTGCCATGA
GAATCGGATTAACAAGTGCAGCAGTATATCTTTTGAACATTCCGTTCTTGCAGTGCGCCGGCGGAATTTTCCTGCTGTAT
TTAGGATATCAGCTGCTGATTGAAAAAAAAGACACGAAACACATTAAAAGCAGCACCTCCCTGTGGAGAGCGATACGAAC
GATTGTGCTTGCAGATCTCTTTATGTCGCTGGACAACGTCATCGCAGTTGCGGGAGCTTCACACGGTGAGTTTTCTCTCG
TTGTTATAGGATTGTGTGTATCGGTTCCGGTTATTATTTGGGGCAGCAAACTCATCCATATTGCACTAGAGAAAATACCG
CTTCTGATTTACGCGGGAAGCGGGCTGCTTGCTTATACTGGCGGAGAAATGATTGTCAGAGACAAAAAGCTGTCGCTTTT
TATGGCGCAGCACGGCACAGTCGAAACGCTCCTCCCCATTTTGACGGTTGCGTTTGTCATCCTTGCGAGCATTTATTACC
AGCAGGTTGAAAAATAA

Upstream 100 bases:

>100_bases
TTGCCTAAAAAACGGCAGATCAGGCGGCTGATATCATAAAATATGACCTGTCTCATATAGTAGTAGTACAAGCGAAGGAC
TGAAAGCGAGGTGCCGCTTC

Downstream 100 bases:

>100_bases
AAGAAGGCTGATGACTCAGCCTTCTTTTGATGATACGATCTATTAGTTTGCCAAACGCTGTGCTTCTCTTAATTGGAAAG
AGCGAACTTTTCTTGGCAGG

Product: transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRQQAIILGTFIAVAMRIGLTSAAVYLLNIPFLQCAGGIFLLY
LGYQLLIEKKDTKHIKSSTSLWRAIRTIVLADLFMSLDNVIAVAGASHGEFSLVVIGLCVSVPVIIWGSKLIHIALEKIP
LLIYAGSGLLAYTGGEMIVRDKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK

Sequences:

>Translated_218_residues
MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRQQAIILGTFIAVAMRIGLTSAAVYLLNIPFLQCAGGIFLLY
LGYQLLIEKKDTKHIKSSTSLWRAIRTIVLADLFMSLDNVIAVAGASHGEFSLVVIGLCVSVPVIIWGSKLIHIALEKIP
LLIYAGSGLLAYTGGEMIVRDKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK
>Mature_218_residues
MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRQQAIILGTFIAVAMRIGLTSAAVYLLNIPFLQCAGGIFLLY
LGYQLLIEKKDTKHIKSSTSLWRAIRTIVLADLFMSLDNVIAVAGASHGEFSLVVIGLCVSVPVIIWGSKLIHIALEKIP
LLIYAGSGLLAYTGGEMIVRDKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family

Homologues:

Organism=Escherichia coli, GI1788119, Length=145, Percent_Identity=33.1034482758621, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJBE_BACSU (O31603)

Other databases:

- EMBL:   AL009126
- PIR:   E69843
- RefSeq:   NP_389033.1
- ProteinModelPortal:   O31603
- EnsemblBacteria:   EBBACT00000001391
- GeneID:   939805
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11510
- NMPDR:   fig|224308.1.peg.1152
- GenoList:   BSU11510
- GeneTree:   EBGT00050000001198
- HOGENOM:   HBG660404
- OMA:   NIWAAIR
- ProtClustDB:   CLSK887066
- BioCyc:   BSUB:BSU11510-MONOMER
- InterPro:   IPR005496
- InterPro:   IPR022301
- TIGRFAMs:   TIGR03717

Pfam domain/function: PF03741 TerC

EC number: NA

Molecular weight: Translated: 23746; Mature: 23746

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe27488c)-; HASH(0xb8d9a14)-; HASH(0xe3cb164)-; HASH(0xcec46b8)-; HASH(0xe5e86ec)-; HASH(0xe133bdc)-; HASH(0xe5f9c68)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRQQAIILGTFIAVAMRIGLTSA
CCHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVYLLNIPFLQCAGGIFLLYLGYQLLIEKKDTKHIKSSTSLWRAIRTIVLADLFMSLDNV
HHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVAGASHGEFSLVVIGLCVSVPVIIWGSKLIHIALEKIPLLIYAGSGLLAYTGGEMIVR
HEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEECCCEEEEECCEEEEE
DKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK
CCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRQQAIILGTFIAVAMRIGLTSA
CCHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVYLLNIPFLQCAGGIFLLYLGYQLLIEKKDTKHIKSSTSLWRAIRTIVLADLFMSLDNV
HHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVAGASHGEFSLVVIGLCVSVPVIIWGSKLIHIALEKIPLLIYAGSGLLAYTGGEMIVR
HEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEECCCEEEEECCEEEEE
DKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK
CCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377