Click here to switch to the map view.

The map label for this gene is yitE

Identifier: 16078160

GI number: 16078160

Start: 1174136

End: 1174765

Strand: Reverse

Name: yitE

Synonym: BSU10960

Alternate gene names: 16078160

Gene position: 1174765-1174136 (Counterclockwise)

Preceding gene: 16078161

Following gene: 50812215

Centisome position: 27.87

GC content: 45.87

Gene sequence:

>630_bases
ATGGCTGAACTGCTGATGAAAGCAAAACTTACGTTTATGATTGTCGTAGGCGGCGTACTACAAGGACTCGGCATGTCCTT
GTTTTTATTTCCGCATGATATTCCGACAGGCGGTGCAGCAGGTATTGCGGTGCTATTGCATTATCTGTTTCAAATCCCCC
ACGGATTTTCAGTGTGGGCTGTGAATGTATCAATGCTTTTTACCGCTTTAAAATGGCTGGAGATGAGAACATTCACCGGC
ACCCTCGCTTCTATCACCGTCACCTCTGTCTCGGTATTGATCTTTGATGCAGTTTTTCCTGATATCACATCTAACCTGTG
GCTTGATCTGGCAAGCGGCGCAGTGTTATTGGGACTCGGAATCGGACTTTTATACAAATATAAAATTTCGAACGGAGGAT
TCGGAGCCCTTGCTCTGATGATTTCTATCTACCGCGGCGGGAATCCTGGAACGATCCTGCTCATCATGAATTGCATCATT
TTTATGGTCACCGCGTCTATTATTGACTGGGGCATCGTCATTCAAGCCCTCATATGCCAGGTGATATCGACAAGAGTCAT
CGACTTCATCTACAACATCCGCCTGACCTCACTTCCCTATCTCACGCCTATGTACCGCCATAAAAAATAA

Upstream 100 bases:

>100_bases
ATTAAGCTGGGCCATTTCTTTATTTTGAGACATAAATAATGGACAGCCTCATAAAATGAAAACAGCGGACAAGTCTTTTC
ATAAAGGAGCAAATGACTTA

Downstream 100 bases:

>100_bases
TAGGCAGAGGCTCTCTTCACGACGAGAGCCCCGCAGCCGCTATTTTACAGAAAAAAGGTATCGGATCTTAGCCCTAAACG
CAGCGTTTCCAACGCGATGG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAELLMKAKLTFMIVVGGVLQGLGMSLFLFPHDIPTGGAAGIAVLLHYLFQIPHGFSVWAVNVSMLFTALKWLEMRTFTG
TLASITVTSVSVLIFDAVFPDITSNLWLDLASGAVLLGLGIGLLYKYKISNGGFGALALMISIYRGGNPGTILLIMNCII
FMVTASIIDWGIVIQALICQVISTRVIDFIYNIRLTSLPYLTPMYRHKK

Sequences:

>Translated_209_residues
MAELLMKAKLTFMIVVGGVLQGLGMSLFLFPHDIPTGGAAGIAVLLHYLFQIPHGFSVWAVNVSMLFTALKWLEMRTFTG
TLASITVTSVSVLIFDAVFPDITSNLWLDLASGAVLLGLGIGLLYKYKISNGGFGALALMISIYRGGNPGTILLIMNCII
FMVTASIIDWGIVIQALICQVISTRVIDFIYNIRLTSLPYLTPMYRHKK
>Mature_208_residues
AELLMKAKLTFMIVVGGVLQGLGMSLFLFPHDIPTGGAAGIAVLLHYLFQIPHGFSVWAVNVSMLFTALKWLEMRTFTGT
LASITVTSVSVLIFDAVFPDITSNLWLDLASGAVLLGLGIGLLYKYKISNGGFGALALMISIYRGGNPGTILLIMNCIIF
MVTASIIDWGIVIQALICQVISTRVIDFIYNIRLTSLPYLTPMYRHKK

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YITE_BACSU (O06740)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   F69839
- RefSeq:   NP_388977.1
- ProteinModelPortal:   O06740
- EnsemblBacteria:   EBBACT00000002099
- GeneID:   936377
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10960
- NMPDR:   fig|224308.1.peg.1096
- GenoList:   BSU10960
- GeneTree:   EBGT00070000032078
- HOGENOM:   HBG033274
- OMA:   MISIYRG
- ProtClustDB:   CLSK237515
- BioCyc:   BSUB:BSU10960-MONOMER
- InterPro:   IPR003740

Pfam domain/function: PF02588 DUF161

EC number: NA

Molecular weight: Translated: 22807; Mature: 22676

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe347658)-; HASH(0xdfc8bd8)-; HASH(0xdda9280)-; HASH(0xbfe6c98)-; HASH(0xdf27e64)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLMKAKLTFMIVVGGVLQGLGMSLFLFPHDIPTGGAAGIAVLLHYLFQIPHGFSVWA
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEH
VNVSMLFTALKWLEMRTFTGTLASITVTSVSVLIFDAVFPDITSNLWLDLASGAVLLGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGLLYKYKISNGGFGALALMISIYRGGNPGTILLIMNCIIFMVTASIIDWGIVIQALICQ
HHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISTRVIDFIYNIRLTSLPYLTPMYRHKK
HHHHHHHHHHHHHHHCCCCCCCCHHHCCH
>Mature Secondary Structure 
AELLMKAKLTFMIVVGGVLQGLGMSLFLFPHDIPTGGAAGIAVLLHYLFQIPHGFSVWA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEH
VNVSMLFTALKWLEMRTFTGTLASITVTSVSVLIFDAVFPDITSNLWLDLASGAVLLGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGLLYKYKISNGGFGALALMISIYRGGNPGTILLIMNCIIFMVTASIIDWGIVIQALICQ
HHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISTRVIDFIYNIRLTSLPYLTPMYRHKK
HHHHHHHHHHHHHHHCCCCCCCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377