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The map label for this gene is yhjP

Identifier: 16078123

GI number: 16078123

Start: 1133498

End: 1135225

Strand: Direct

Name: yhjP

Synonym: BSU10590

Alternate gene names: 16078123

Gene position: 1133498-1135225 (Clockwise)

Preceding gene: 16078120

Following gene: 255767242

Centisome position: 26.89

GC content: 47.51

Gene sequence:

>1728_bases
TTGAAGCTGATAGAGCACTACGTGGCGCTTGTAAAAACAGGCTGCGCCGAGTATGGGCAAATGAACGAAATGACGCTCAC
TGAGATTGCCGACTGTTTATTTTGTACAGAAAGAAATGCAAAGCTCATTTTACATAAGCTGGAGAACAGCAATTGGATTA
TCCGGGAAAGCGGGGCGGGGCGCGGCCGCAAATCTAAAATCGCGTTTCTTCGGAGGCCTGAGGAACTGCTTCTTCAAACT
GCAAAGGAATATACCATGTCAGGAAAGCTTAAAAAGGCAAAGGAGCTGCTTCAGCAGTATCAGTCCGCGTTTCCAGGGCT
TCAAAACGAATATAACATGTGGCTATCAGAGGTATTCGGATTTGTGACGGAGACAGGCGAGAATGGGGCGAAGGATGTCC
TGCGGCTGTTCATCACGCCTGAATCTGTCAGCAGTTTGGATCCATGCCAAATATTTTTGCGGTCTGAGGGCCATTTCGTC
AAACAGATATTTGATACACTCTTCACGTTTGATTCGGATATGCAGGAGCCGAAGCCTCATTTGGTTCATGGATGGGAAGA
GGTCGGAAAAAAACAATGGAGATTTTTTCTTCGAAAAGGTGTGTTATTTCATAATGGACAGCCGCTGACATCGCGGGACG
TTGCGTTTACATTTCAGCGCTTTTTGGAACTGGCTGACAACCCGTATAAATGGCTTCTGCACGGAGTGAAACAAGTCTTA
GAAAAGGGCCCTTATTGTGTGGAGCTCATACTCGATAAGCCGAATGCGCTTTTGCCGTATGCTCTTTGTGATGAACGGCT
GTCCATACTGCCGGCAGAACAGGGCGGCGGGAAAAATGGAACAGGGCCTTTTCAGATGAATCAGCAACATAGCGGGATGC
TTGTGCTTGAAGCCAATGAGCGCTACTTCAAGGGACGCCCCTATTTGGATCGCGTTGAGTTTGTGTTTTCTGAGCAAGCC
GGAGAGATGAACGGTTTTACCATTCAAGAAAAACAAACATGTCCTGAGCAGCAAACTGTCTTTGATGAGCGGCATGTTCA
GTATTTGTCGCTTAATCTGAAAAAGAAGGGGCCTCTTCAGCACCGAAGCTTTAGAAAAGCGCTCCGGCTGCTGATTTCCT
CTGAACGGCTCGTTCGTGAAGCGGGAGGGCACCGAAGAATTCCGGTTACGTCCTTTTTGCATCCGAGTCCTTTTGAGTGG
GAGGGCGTTTCGCCATCTGAATTGTTGAAAAAAAGCGGATACGAGGGCGAAACAATCGTGCTTTATACCTTTTCGGAAAC
GGATCATCGTGAGGACGCCGAATGGATTCAAAATATTTGCGCCCAGCACGGTATCAGGCTTACACTTCAATTCTGTGATG
CTGCTGATCTGCGACGGCCGGAAATCGTGCAGATGGCGGATATCATTCATGACAGTGCGACGTTTTATCAAGACAGCGAG
TTTGGTTTTCTGCATTTGCTGCTGTCGGAGAACAGTTTCTTGTATCAGCATCTATCTGAAAAGCTGACACAGATTTGCTC
AGGAATGACAGAGCGGATGTTTTCCATGCCTGACCGCTGTTCGAGAATCAACATCCTGCGTGACATTGACCGGCAGATGA
TACAGGAGCTGAACGCGATCCCGCTGTATCAAAATGTGCTCCAGGTGACATCAAGTAAAAATGTAAAAGGCCTGGTGCTT
GATGAAGAGGGATGGATTGATTTGTACTCCGTATGGCTGTCCAAATAA

Upstream 100 bases:

>100_bases
TTCGCTGTTTGATATAGTAGTAGTGTATAGAAGGGGCGGCGGCCCAAAAAGTGAAGAAAAGAAGAGATAAAAGTTCCCCT
TTTGTCGGGAGGTGCGGGGA

Downstream 100 bases:

>100_bases
AAAGAGGGTTCTTTTTTGAACCCTCTTTTTTACGCTGCCATGCTGCGGCATTGTTCAGCACAGGTGAAGCAGGCTTTCGC
ACATGCTTGGCAATGATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAGRGRKSKIAFLRRPEELLLQT
AKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFGFVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFV
KQIFDTLFTFDSDMQEPKPHLVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVL
EKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANERYFKGRPYLDRVEFVFSEQA
GEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQHRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEW
EGVSPSELLKKSGYEGETIVLYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSE
FGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAIPLYQNVLQVTSSKNVKGLVL
DEEGWIDLYSVWLSK

Sequences:

>Translated_575_residues
MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAGRGRKSKIAFLRRPEELLLQT
AKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFGFVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFV
KQIFDTLFTFDSDMQEPKPHLVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVL
EKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANERYFKGRPYLDRVEFVFSEQA
GEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQHRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEW
EGVSPSELLKKSGYEGETIVLYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSE
FGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAIPLYQNVLQVTSSKNVKGLVL
DEEGWIDLYSVWLSK
>Mature_575_residues
MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAGRGRKSKIAFLRRPEELLLQT
AKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFGFVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFV
KQIFDTLFTFDSDMQEPKPHLVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVL
EKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANERYFKGRPYLDRVEFVFSEQA
GEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQHRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEW
EGVSPSELLKKSGYEGETIVLYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSE
FGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAIPLYQNVLQVTSSKNVKGLVL
DEEGWIDLYSVWLSK

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1786256, Length=574, Percent_Identity=24.9128919860627, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1786650, Length=573, Percent_Identity=23.5602094240838, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJP_BACSU (O07570)

Other databases:

- EMBL:   Y14081
- EMBL:   AL009126
- PIR:   G69834
- RefSeq:   NP_388940.1
- ProteinModelPortal:   O07570
- EnsemblBacteria:   EBBACT00000000507
- GeneID:   936342
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10590
- NMPDR:   fig|224308.1.peg.1059
- GenoList:   BSU10590
- GeneTree:   EBGT00050000001986
- HOGENOM:   HBG339739
- OMA:   TSHEKVQ
- PhylomeDB:   O07570
- ProtClustDB:   CLSK887024
- BioCyc:   BSUB:BSU10590-MONOMER
- InterPro:   IPR000914
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF00496 SBP_bac_5

EC number: NA

Molecular weight: Translated: 66376; Mature: 66376

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS01117 HTH_MARR_1; PS50995 HTH_MARR_2; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAG
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCC
RGRKSKIAFLRRPEELLLQTAKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFG
CCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFVKQIFDTLFTFDSDMQEPKPH
HHHCCCCCHHHHHHHHEECCHHCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCH
LVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVL
HCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANE
HCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC
RYFKGRPYLDRVEFVFSEQAGEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQ
CEECCCCCHHHHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHCEEEEEEECCCCCCCH
HRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEWEGVSPSELLKKSGYEGETIV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
LYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSE
EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCC
FGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAI
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PLYQNVLQVTSSKNVKGLVLDEEGWIDLYSVWLSK
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure
MKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAG
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCC
RGRKSKIAFLRRPEELLLQTAKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFG
CCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGHFVKQIFDTLFTFDSDMQEPKPH
HHHCCCCCHHHHHHHHEECCHHCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCH
LVHGWEEVGKKQWRFFLRKGVLFHNGQPLTSRDVAFTFQRFLELADNPYKWLLHGVKQVL
HCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EKGPYCVELILDKPNALLPYALCDERLSILPAEQGGGKNGTGPFQMNQQHSGMLVLEANE
HCCCEEEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC
RYFKGRPYLDRVEFVFSEQAGEMNGFTIQEKQTCPEQQTVFDERHVQYLSLNLKKKGPLQ
CEECCCCCHHHHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHCEEEEEEECCCCCCCH
HRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSPFEWEGVSPSELLKKSGYEGETIV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
LYTFSETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSE
EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCC
FGFLHLLLSENSFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAI
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PLYQNVLQVTSSKNVKGLVLDEEGWIDLYSVWLSK
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377