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The map label for this gene is ygxB

Identifier: 16078004

GI number: 16078004

Start: 1013958

End: 1015616

Strand: Reverse

Name: ygxB

Synonym: BSU09390

Alternate gene names: 16078004

Gene position: 1015616-1013958 (Counterclockwise)

Preceding gene: 255767221

Following gene: 16078003

Centisome position: 24.09

GC content: 44.79

Gene sequence:

>1659_bases
ATGTATGAGCCCGCCAGACAAAAGATGATAGTCTCACTCGGGCAAGAAAAAATTCCCCCGGCACATTCATCTGTTTGCTT
ATTGGATAAGTGGGTAAACACACACCATACTACGAAAAAGGAGCGATACCAATTGAATGTAGCAGACGTGTTTTCTTCTT
ATCTCAGTAAGCTGCCAAACGTAATCATTGCTTTACTCGTCTTATTAATCGGCTGGGCTATTGCTAAAATCATTGAAAAA
GCGGTATACAAAGGACTCAGCAAAACAAAAATCGACGACAAGCTCTTTGCTGGGAAAAAGCCTTCACGCTATTCCTCGGA
AAAAGTCATAAGCAAGGTCGTTTATTTTATCGCACTGATCATCGTCTTTATTTTATTCTTTAACATTTTGCACCTGACAA
CAGTGGCATCGCCGTTTGTCAGTATGCTTTCGGCGATTGCAGCTGCGATCCCAAGCGTGCTGAAAGCCGGACTCATTCTG
CTGTTAGGATGGGCTGCAGCTTCTGTTTTGAGCTTCCTTGTCAAAAAAATCGGGATGAAGCTGAACACGAGTGACAAACT
GCGCAAGTGGAATTTGGTGTCTGAAGGAAAAGATATTCACCAGGCTGTCAATACCGCTTCACAAATTGTCTTTTATCTCG
TGCTGCTTGTTTTTCTGCCAGGGGTCTTATCTTCTTTGAAAATCAGCGGCATTTCAGGTCCTTTTACAAATATGATGGAA
AGCGTGCTCGCTTTTCTGCCGAAATTATTTGCAGCGGCGCTTATCGTATTAATCGGATGGCTTGTTGCCCGCCTTGTCCG
TGATATCATTACGAATTTCCTTGCAAGCATCGGCACCGAAAGATTCGCGGCACGTATGGGTTTATCAATTTACTTAAAAG
ACACAAGCCTTTCAGCAGTCATCGGAACAATCGCTTATGTGCTCATTATGATTCCGGTGGTCATTTCAGCGCTTGATCAG
CTGGATGTCGCCGGCATTTCAAAACCAGCTGTCTCTATGCTGAATACGATTTTAAACATGCTTCCGAACATCATGATTGC
CATCGTGCTTGTATTAGCGGGTATCTGGGCAGGAAAATGGGTGAAATCCATGGTGTCCGGACTGCTCCATCGCGCAGGCT
TTGATTCTGTCTTAGGGAAAATGGGCATGGAAGCCGGAACGCCTGCAAAGCTGTCCTTGTCTCAAGTTGTCGGTATGATT
GCGCAAATCATTGTCATTCTGCTCTTTACAGCTGAGGCGCTTCAAATTGTTCGGCTGCACTTCCTCGTAGAAATTGCCAC
CGGCATCATCGCGTATCTGCCGAATGTCCTTGTCGCAGTATTCATTCTCGGACTCGGCCTTTACGCAGGAGAATTGGTGA
GAAAAGTGCTCGCAAGCATGATAAAAGGTCAGGAATTCAAGTCTTTAGCGCCTATTGCTAAATATACGATTATCGCACTT
GCTTTCTTTATGGCCCTGGATCAGCTGGGTGTCGCTGCGACAATCGTCAATTCCGCGTTCATCATCGTTCTTAGCGGCTT
CGCACTTGCTTTTGGTTTATCCTTCGGCCTTGGCGGTAAGGATTTTGCATCACGTTATCTGTCTACATTTGAACGCAAAA
TGCAAAACACAGAAATCGAAAAAAACCGTAAAAACCAAAATCCGCCGAATGACATGTAA

Upstream 100 bases:

>100_bases
CGAATCCTTTTGCAATTTCGGTAATTTCCTCAATTGCCCGCTGTAATCCCTTCTTCTCCTCCGCGTTCAACCGAATCCCC
CCTACTTGGACTTATCTATA

Downstream 100 bases:

>100_bases
GCAAAAAACATGCACCCAGCTGGGTGCATGTTTTTTAATTCCTTTTTTTTCATTTTTCAATCGATTATGATAAGATATAG
AAAATGTCTTATTCTGAGGT

Product: integral inner membrane protein

Products: NA

Alternate protein names: ORF1

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MYEPARQKMIVSLGQEKIPPAHSSVCLLDKWVNTHHTTKKERYQLNVADVFSSYLSKLPNVIIALLVLLIGWAIAKIIEK
AVYKGLSKTKIDDKLFAGKKPSRYSSEKVISKVVYFIALIIVFILFFNILHLTTVASPFVSMLSAIAAAIPSVLKAGLIL
LLGWAAASVLSFLVKKIGMKLNTSDKLRKWNLVSEGKDIHQAVNTASQIVFYLVLLVFLPGVLSSLKISGISGPFTNMME
SVLAFLPKLFAAALIVLIGWLVARLVRDIITNFLASIGTERFAARMGLSIYLKDTSLSAVIGTIAYVLIMIPVVISALDQ
LDVAGISKPAVSMLNTILNMLPNIMIAIVLVLAGIWAGKWVKSMVSGLLHRAGFDSVLGKMGMEAGTPAKLSLSQVVGMI
AQIIVILLFTAEALQIVRLHFLVEIATGIIAYLPNVLVAVFILGLGLYAGELVRKVLASMIKGQEFKSLAPIAKYTIIAL
AFFMALDQLGVAATIVNSAFIIVLSGFALAFGLSFGLGGKDFASRYLSTFERKMQNTEIEKNRKNQNPPNDM

Sequences:

>Translated_552_residues
MYEPARQKMIVSLGQEKIPPAHSSVCLLDKWVNTHHTTKKERYQLNVADVFSSYLSKLPNVIIALLVLLIGWAIAKIIEK
AVYKGLSKTKIDDKLFAGKKPSRYSSEKVISKVVYFIALIIVFILFFNILHLTTVASPFVSMLSAIAAAIPSVLKAGLIL
LLGWAAASVLSFLVKKIGMKLNTSDKLRKWNLVSEGKDIHQAVNTASQIVFYLVLLVFLPGVLSSLKISGISGPFTNMME
SVLAFLPKLFAAALIVLIGWLVARLVRDIITNFLASIGTERFAARMGLSIYLKDTSLSAVIGTIAYVLIMIPVVISALDQ
LDVAGISKPAVSMLNTILNMLPNIMIAIVLVLAGIWAGKWVKSMVSGLLHRAGFDSVLGKMGMEAGTPAKLSLSQVVGMI
AQIIVILLFTAEALQIVRLHFLVEIATGIIAYLPNVLVAVFILGLGLYAGELVRKVLASMIKGQEFKSLAPIAKYTIIAL
AFFMALDQLGVAATIVNSAFIIVLSGFALAFGLSFGLGGKDFASRYLSTFERKMQNTEIEKNRKNQNPPNDM
>Mature_552_residues
MYEPARQKMIVSLGQEKIPPAHSSVCLLDKWVNTHHTTKKERYQLNVADVFSSYLSKLPNVIIALLVLLIGWAIAKIIEK
AVYKGLSKTKIDDKLFAGKKPSRYSSEKVISKVVYFIALIIVFILFFNILHLTTVASPFVSMLSAIAAAIPSVLKAGLIL
LLGWAAASVLSFLVKKIGMKLNTSDKLRKWNLVSEGKDIHQAVNTASQIVFYLVLLVFLPGVLSSLKISGISGPFTNMME
SVLAFLPKLFAAALIVLIGWLVARLVRDIITNFLASIGTERFAARMGLSIYLKDTSLSAVIGTIAYVLIMIPVVISALDQ
LDVAGISKPAVSMLNTILNMLPNIMIAIVLVLAGIWAGKWVKSMVSGLLHRAGFDSVLGKMGMEAGTPAKLSLSQVVGMI
AQIIVILLFTAEALQIVRLHFLVEIATGIIAYLPNVLVAVFILGLGLYAGELVRKVLASMIKGQEFKSLAPIAKYTIIAL
AFFMALDQLGVAATIVNSAFIIVLSGFALAFGLSFGLGGKDFASRYLSTFERKMQNTEIEKNRKNQNPPNDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGXB_BACSU (P37874)

Other databases:

- EMBL:   Y14082
- EMBL:   AL009126
- EMBL:   L26337
- PIR:   F69817
- RefSeq:   NP_388820.1
- ProteinModelPortal:   P37874
- EnsemblBacteria:   EBBACT00000002225
- GeneID:   936263
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09390
- NMPDR:   fig|224308.1.peg.939
- GenoList:   BSU09390
- GeneTree:   EBGT00050000002651
- HOGENOM:   HBG338671
- OMA:   TIVYVLI
- ProtClustDB:   CLSK886955
- BioCyc:   BSUB:BSU09390-MONOMER
- InterPro:   IPR008910

Pfam domain/function: PF05552 TM_helix

EC number: NA

Molecular weight: Translated: 59971; Mature: 59971

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCC
>Mature Secondary Structure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HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469