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The map label for this gene is yhdB

Identifier: 16078000

GI number: 16078000

Start: 1010984

End: 1011226

Strand: Reverse

Name: yhdB

Synonym: BSU09350

Alternate gene names: 16078000

Gene position: 1011226-1010984 (Counterclockwise)

Preceding gene: 255767220

Following gene: 255767213

Centisome position: 23.99

GC content: 37.04

Gene sequence:

>243_bases
ATGGATTATGCCGATTACGATAAAGCGCTTTATTACACCCATCGTTCTCAATGGGATAATTTATTAATTTTAATGGTGCG
TACAGAGGACGATTTGTTATCAAAACGAATTGAGCATTTTCTGCATGCGTATCATTTTGAACAGGATTACGCCGTTTTAG
AAAAGATGCTGTATTCCCTTCTCCGATATATTGATCATGCCACAGAGCTGACTTATGAAGATCAAATAGCCCTTCTCACA
TAA

Upstream 100 bases:

>100_bases
CCCCTTTACTGACGCAGACGGCAAGTTTTGCCCCGTCAATAACAGAGGATGCGGCATAAACTAATCATGAACTTCTCACC
CAAGAAAGGAGAAGCGATTC

Downstream 100 bases:

>100_bases
ACAAATCCCGGCGTTTAGACGCCGGGATTTCCTGCTTTTGCGAACATGCTGAGTTCTTCGACAAGCTCTTTTATGCTTTC
CTTAATGTTTTCAGCCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDYAVLEKMLYSLLRYIDHATELTYEDQIALLT

Sequences:

>Translated_80_residues
MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDYAVLEKMLYSLLRYIDHATELTYEDQIALLT
>Mature_80_residues
MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDYAVLEKMLYSLLRYIDHATELTYEDQIALLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDB_BACSU (O07530)

Other databases:

- EMBL:   Y14079
- EMBL:   AL009126
- PIR:   H69824
- RefSeq:   NP_388816.1
- EnsemblBacteria:   EBBACT00000001290
- GeneID:   939272
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09350
- NMPDR:   fig|224308.1.peg.935
- GenoList:   BSU09350
- GeneTree:   EBGT00050000001140
- HOGENOM:   HBG337636
- OMA:   ALYYTHR
- ProtClustDB:   CLSK886951
- BioCyc:   BSUB:BSU09350-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9793; Mature: 9793

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDYAVLEKMLYSL
CCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRYIDHATELTYEDQIALLT
HHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDYAVLEKMLYSL
CCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRYIDHATELTYEDQIALLT
HHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377