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The map label for this gene is yfkD

Identifier: 16077860

GI number: 16077860

Start: 866331

End: 867125

Strand: Direct

Name: yfkD

Synonym: BSU07930

Alternate gene names: 16077860

Gene position: 866331-867125 (Clockwise)

Preceding gene: 16077859

Following gene: 16077864

Centisome position: 20.55

GC content: 44.15

Gene sequence:

>795_bases
ATGATGAAAAAGCTATTTCATTCCACACTTATTGTGTTGTTATTCTTTAGTTTTTTCGGCGTTCAGCCCATCCACGCGAA
AAAGCAGTTTAAGGTTCCTAATTCTGTCGCAAGCATTTCAAAGGAAAACACGTATCCGAATGCTTCACAGGATCAGCCAA
TGCTTCAGCCGAGCAAGCTGGCAAAGGAATTGCTCGATCATTCTGAGGTAAAGATTGAAAATCCGCATCTCATCAAAATG
CTGAATGAATCCAACATATCCGGCACACCGCTTGCAGTAGGGTACCGGGCGACAATATTTCTCGGGAAATGGGCGCTCGG
CTATGAATCAAATGAAACAGTCGCAAACTGGGAATATAAAAAAATCAATACAAACCGTGCGGATAACCGCGGCGGGAAAG
AAACGGCTGAAATGCATTATGCCCAGGAACAGCAGTACAGAGTGAAGGGCGGCTTGACAGCTAAAGTTCCAAATGCTGAA
GATGTCAAAAGCATGATGATGCAAAAAGCAATGAAGAAAACGAACCTCCCGCTTGCATTTGAGACGGTCATCGGGGCTGG
CACAAAACGGGATCAGATTTATAAAGTCGCTCCTAAAAAAATCGGTTATCTACATGCATATGCACCGGCTGTGAATGAAA
AAGGAAAAGTGACTTACGGAGAAGTGTACTTAGTGCTGAAAGGAAATAAACGAAAACTCGTCGTGAAAAATGTCACGTCA
CAGGGAATCGGCGCGTGGATTCCGGTTCAAGATCATGTCACGTTTGGCTTTCAGCTTTCCTCACTGCCAAGATAA

Upstream 100 bases:

>100_bases
ATTATGGCGATCGGCTTTTTCCTTCTTTAACCTGAAAAAATGATGGATAACAACAAAGCGGGATGAAAAGACTAAGGGAA
AATGCCATAGAAAGAGTGAT

Downstream 100 bases:

>100_bases
ATAAAAAACTGATTCCAACTCGGAATCAGTTTTTTTGTTTATTGGGTTCTCTCGATTCGGACCGCTTCCTCAAGCATTTG
CACATTGTTTTGGTAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKLAKELLDHSEVKIENPHLIKM
LNESNISGTPLAVGYRATIFLGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKGGLTAKVPNAE
DVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKKIGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTS
QGIGAWIPVQDHVTFGFQLSSLPR

Sequences:

>Translated_264_residues
MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKLAKELLDHSEVKIENPHLIKM
LNESNISGTPLAVGYRATIFLGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKGGLTAKVPNAE
DVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKKIGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTS
QGIGAWIPVQDHVTFGFQLSSLPR
>Mature_264_residues
MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKLAKELLDHSEVKIENPHLIKM
LNESNISGTPLAVGYRATIFLGKWALGYESNETVANWEYKKINTNRADNRGGKETAEMHYAQEQQYRVKGGLTAKVPNAE
DVKSMMMQKAMKKTNLPLAFETVIGAGTKRDQIYKVAPKKIGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTS
QGIGAWIPVQDHVTFGFQLSSLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFKD_BACSU (O34579)

Other databases:

- EMBL:   D83967
- EMBL:   AL009126
- PIR:   H69807
- RefSeq:   NP_388674.1
- ProteinModelPortal:   O34579
- EnsemblBacteria:   EBBACT00000001312
- GeneID:   936138
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07930
- NMPDR:   fig|224308.1.peg.793
- GenoList:   BSU07930
- GeneTree:   EBGT00050000002558
- HOGENOM:   HBG313982
- OMA:   AWIPVQD
- ProtClustDB:   CLSK872857
- BioCyc:   BSUB:BSU07930-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29588; Mature: 29588

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH
AKELLDHSEVKIENPHLIKMLNESNISGTPLAVGYRATIFLGKWALGYESNETVANWEYK
HHHHHCCCCEEECCCCEEEEECCCCCCCCCEEECEEEEEEEEEEEECCCCCCCEECEEEE
KINTNRADNRGGKETAEMHYAQEQQYRVKGGLTAKVPNAEDVKSMMMQKAMKKTNLPLAF
EECCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCEEE
ETVIGAGTKRDQIYKVAPKKIGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTS
HHHHCCCCCCCCEEEECCHHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCC
QGIGAWIPVQDHVTFGFQLSSLPR
CCCEEEEEECCCEEEEEEECCCCC
>Mature Secondary Structure
MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH
AKELLDHSEVKIENPHLIKMLNESNISGTPLAVGYRATIFLGKWALGYESNETVANWEYK
HHHHHCCCCEEECCCCEEEEECCCCCCCCCEEECEEEEEEEEEEEECCCCCCCEECEEEE
KINTNRADNRGGKETAEMHYAQEQQYRVKGGLTAKVPNAEDVKSMMMQKAMKKTNLPLAF
EECCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCEEE
ETVIGAGTKRDQIYKVAPKKIGYLHAYAPAVNEKGKVTYGEVYLVLKGNKRKLVVKNVTS
HHHHCCCCCCCCEEEECCHHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCC
QGIGAWIPVQDHVTFGFQLSSLPR
CCCEEEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377