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The map label for this gene is immR

Identifier: 16077549

GI number: 16077549

Start: 531130

End: 531513

Strand: Reverse

Name: immR

Synonym: BSU04820

Alternate gene names: 16077549

Gene position: 531513-531130 (Counterclockwise)

Preceding gene: 16077567

Following gene: 16077548

Centisome position: 12.61

GC content: 33.33

Gene sequence:

>384_bases
ATGAGCCTAGGCAAACGATTAAAAGAAGCTCGACAAAAAGCTGGGTACACTCAGAAAGAAGCCGCAGAGAAACTTAATAT
CGGTAACAATAACTTGTCTAATTACGAAAGAGATTACAGAGATCCTGATACAGACACACTCTTAAAATTGAGCAACTTAT
ATAACGTATCTACAGACTATTTATTAGGAAAGGATGAAGTAAGCAAGAAAAACGAAACTGATTTACTCAATAAAACAATT
AATGAAGCCATACAGGAATTAAAGGATGAAGATACACTCCTTTTTATGAATGATGGTGAATTTGATGAGGAAACTGCACG
CCTTGTTAAAAAAGCATTAAAAAACGGAATTAAATTCATTGACGAATTAAAGAAGAAAGAGTGA

Upstream 100 bases:

>100_bases
AGAATTATTTATTTAACTTATAGGTGAAATTAATGAATTCTCCAAAAAATGTTGTTATTATTTTTATAAAAATCAACTCT
TTGTGAAATGGATGATAAAA

Downstream 100 bases:

>100_bases
TAACAATTTATACAAGCAAAGGAATTAAACATAAAGTGCAATCAGTAATTAAGACACATGGTACAAATAATGTCTATGAA
ATTTGTGACATCCAAAAAAT

Product: phage element (ICEBs1)transcriptional regulator (Xre family)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDYLLGKDEVSKKNETDLLNKTI
NEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFIDELKKKE

Sequences:

>Translated_127_residues
MSLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDYLLGKDEVSKKNETDLLNKTI
NEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFIDELKKKE
>Mature_126_residues
SLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDYLLGKDEVSKKNETDLLNKTIN
EAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFIDELKKKE

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IMMR_BACSU (P96631)

Other databases:

- EMBL:   AB001488
- EMBL:   AL009126
- PIR:   C69774
- RefSeq:   NP_388363.1
- ProteinModelPortal:   P96631
- SMR:   P96631
- EnsemblBacteria:   EBBACT00000001609
- GeneID:   938150
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU04820
- NMPDR:   fig|224308.1.peg.482
- GenoList:   BSU04820
- GeneTree:   EBGT00070000032703
- HOGENOM:   HBG727458
- OMA:   EDTLLFM
- ProtClustDB:   CLSK214471
- BioCyc:   BSUB:BSU04820-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 14650; Mature: 14518

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDY
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH
LLGKDEVSKKNETDLLNKTINEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFI
EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
DELKKKE
HHHHCCC
>Mature Secondary Structure 
SLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDY
CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH
LLGKDEVSKKNETDLLNKTINEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFI
EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
DELKKKE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377