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The map label for this gene is ydaS

Identifier: 16077504

GI number: 16077504

Start: 492654

End: 492911

Strand: Reverse

Name: ydaS

Synonym: BSU04370

Alternate gene names: 16077504

Gene position: 492911-492654 (Counterclockwise)

Preceding gene: 16077505

Following gene: 16077503

Centisome position: 11.69

GC content: 54.26

Gene sequence:

>258_bases
ATGCTTAGCTTTTTGGTTTCATTAGTTGTTGCAATTGTTATCGGATTAATTGGGAGCGCCATTGTAGGAAACCGGCTGCC
GGGAGGAATTTTCGGCTCTATGATTGCCGGGCTGATCGGCGCTTGGATTGGGCACGGACTTCTTGGCACATGGGGACCGA
GCCTCGCCGGCTTTGCTATTTTCCCGGCCATCATCGGGGCAGCCATCTTCGTGTTCTTGCTGGGCCTTATATTCCGCGGG
CTGCGGAAGGAAGCCTAG

Upstream 100 bases:

>100_bases
GAAAGATTAAAACAGGATCATAAAGGAATATGCTTTCAAGTGTTTCGAAATGATCAGGAGCGGTTATTGATTGGTAAATC
ATTTATGAGAGGTGATCATG

Downstream 100 bases:

>100_bases
ACTCATTAGATACAGGAGGCATCGTTTCGAAATGAAACGATGTCTTTTTATATGGGACCTTATCACGAATCCCTACATAT
CATGTTACATAACAGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MLSFLVSLVVAIVIGLIGSAIVGNRLPGGIFGSMIAGLIGAWIGHGLLGTWGPSLAGFAIFPAIIGAAIFVFLLGLIFRG
LRKEA

Sequences:

>Translated_85_residues
MLSFLVSLVVAIVIGLIGSAIVGNRLPGGIFGSMIAGLIGAWIGHGLLGTWGPSLAGFAIFPAIIGAAIFVFLLGLIFRG
LRKEA
>Mature_85_residues
MLSFLVSLVVAIVIGLIGSAIVGNRLPGGIFGSMIAGLIGAWIGHGLLGTWGPSLAGFAIFPAIIGAAIFVFLLGLIFRG
LRKEA

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDAS_BACSU (P96594)

Other databases:

- EMBL:   AB001488
- EMBL:   EU084745
- EMBL:   AL009126
- PIR:   B69770
- RefSeq:   NP_388318.1
- EnsemblBacteria:   EBBACT00000003271
- GeneID:   938230
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU04370
- NMPDR:   fig|224308.1.peg.437
- GenoList:   BSU04370
- GeneTree:   EBGT00050000002003
- HOGENOM:   HBG754976
- OMA:   IGAWIGQ
- ProtClustDB:   CLSK886726
- BioCyc:   BSUB:BSU04370-MONOMER
- InterPro:   IPR007341

Pfam domain/function: PF04226 Transgly_assoc

EC number: NA

Molecular weight: Translated: 8649; Mature: 8649

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xaf65824)-; HASH(0xcd739e8)-; HASH(0xc1e2950)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFLVSLVVAIVIGLIGSAIVGNRLPGGIFGSMIAGLIGAWIGHGLLGTWGPSLAGFAI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH
FPAIIGAAIFVFLLGLIFRGLRKEA
HHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLSFLVSLVVAIVIGLIGSAIVGNRLPGGIFGSMIAGLIGAWIGHGLLGTWGPSLAGFAI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH
FPAIIGAAIFVFLLGLIFRGLRKEA
HHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377