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The map label for this gene is ycnE

Identifier: 16077455

GI number: 16077455

Start: 439282

End: 439569

Strand: Reverse

Name: ycnE

Synonym: BSU03870

Alternate gene names: 16077455

Gene position: 439569-439282 (Counterclockwise)

Preceding gene: 16077457

Following gene: 16077454

Centisome position: 10.43

GC content: 42.36

Gene sequence:

>288_bases
ATGATCGTATTACAAGCTTACATCAAAGTAAAACCAGAAAAACGCGAGGAATTTTTGAGCGAGGCTCAATCACTTGTTCA
GCATTCAAGAGCTGAGGAAGGCAACGCGCAATACGACCTATTCGAAAAAGTAGGCGAAGAAAATACATTTGTCATGCTTG
AAAAATGGAAAGATGAAGCGGCAATGAAATTCCATAACGAAACTGCGCATTTCCAAGGGTTTGTCGCAAAAGGAAAAGAA
CTGCTGAGCGCTCCTCTTGATGTTGTCCGCACAGAGCTTAGCGAGTAA

Upstream 100 bases:

>100_bases
ACTATATAAGGGTTTTTCCTTTACCTCATTTAGAATACATGTTACATTTAGTTCGATGAAATTCGAACAATAAATTCGCA
TAACGACGGAGGAGATTTAC

Downstream 100 bases:

>100_bases
AGGAAGGGTGTCTCATATGAATGAAGTGATTAAATCTTTAACAGACCACCGCTCGATTCGCAGCTACACAGATGAGCCTG
TAGCTCAGGAGCAATTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEAAMKFHNETAHFQGFVAKGKE
LLSAPLDVVRTELSE

Sequences:

>Translated_95_residues
MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEAAMKFHNETAHFQGFVAKGKE
LLSAPLDVVRTELSE
>Mature_95_residues
MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEAAMKFHNETAHFQGFVAKGKE
LLSAPLDVVRTELSE

Specific function: Putative monooxygenase that may contribute to the degradation of aromatic compounds (Potential)

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCNE_BACSU (P94425)

Other databases:

- EMBL:   D50453
- EMBL:   AL009126
- PIR:   A69764
- RefSeq:   NP_388269.1
- ProteinModelPortal:   P94425
- SMR:   P94425
- PhosSite:   P94425
- EnsemblBacteria:   EBBACT00000002988
- GeneID:   938274
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03870
- NMPDR:   fig|224308.1.peg.388
- GenoList:   BSU03870
- GeneTree:   EBGT00050000002142
- HOGENOM:   HBG693987
- OMA:   IHGSREE
- ProtClustDB:   CLSK2460887
- BioCyc:   BSUB:BSU03870-MONOMER
- GO:   GO:0005737
- InterPro:   IPR007138
- InterPro:   IPR011008

Pfam domain/function: PF03992 ABM; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 10945; Mature: 10945

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEA
CEEEEEEHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEHHCCHH
AMKFHNETAHFQGFVAKGKELLSAPLDVVRTELSE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEA
CEEEEEEHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEHHCCHH
AMKFHNETAHFQGFVAKGKELLSAPLDVVRTELSE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377