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The map label for this gene is ycxB

Identifier: 16077423

GI number: 16077423

Start: 404458

End: 405015

Strand: Reverse

Name: ycxB

Synonym: BSU03540

Alternate gene names: 16077423

Gene position: 405015-404458 (Counterclockwise)

Preceding gene: 255767109

Following gene: 16077415

Centisome position: 9.61

GC content: 34.41

Gene sequence:

>558_bases
ATGATTCAATATGCTAGTGAAAGTATCAATCTTCCAGGAGAAATCACTTTTAAGGATGTAAGAGAAATCTTTTTTTATCA
AATCGCAAAAATATCATGCTTTTACTTTCTATTGTTTTGCGCCATATTTGCTGCAGTTAACTTCATTAACGGATGGCCCC
GTATCGTTTATGGAAGTGACGCGCTTAACTTGTTTATGAACAGTATGTTGATTATCGTGATGTCCGTTCTGTTTACACTG
CTGCTCCTCCTTCTTCTATATGTGAAGTTTTCCAGAGCATACAAGAAGAACGAACGGATGAAATCCAAAAGAACATATAC
TCTGAACCAAGAAGGAATTCGTATATGTTCTAAAAAATATGACCTCATTTTCAATTGGGATGAAATTACAGCTGTTTTCG
AATATAAAAATATCTTCAGGGTCAATACATCAAGTGGCCAATATATTGCGATCCCCAAACATTTTTTTCACTCCGAAGAG
GAGATGAACAGATTCAAGGAGATTATCCTTAAAAATACCGAAACAAAAAAACTCAAATTTAAAAAGGATCAGCATTGA

Upstream 100 bases:

>100_bases
ATCTGGAGAAAAAAACAAAGCGCCCTGGTATGCCTGCAAAAAAATGAGAAATTATGCTAGACTAAAAGGAAAAACATGGT
TAGAGGTGTAGGTTTACCGT

Downstream 100 bases:

>100_bases
CAGTGCTGATCCTTTTATATTGAATGGTGGGTTTCTTTTGCCTTCTGTTTATCTAAAAACGGCACCAGCTCTATTACAGC
CGATAAACCCACAAACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSDALNLFMNSMLIIVMSVLFTL
LLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEE
EMNRFKEIILKNTETKKLKFKKDQH

Sequences:

>Translated_185_residues
MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSDALNLFMNSMLIIVMSVLFTL
LLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEE
EMNRFKEIILKNTETKKLKFKKDQH
>Mature_185_residues
MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSDALNLFMNSMLIIVMSVLFTL
LLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEE
EMNRFKEIILKNTETKKLKFKKDQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCXB_BACSU (Q08793)

Other databases:

- EMBL:   X70356
- EMBL:   D50453
- EMBL:   AL009126
- PIR:   I40490
- RefSeq:   NP_388236.1
- EnsemblBacteria:   EBBACT00000003673
- GeneID:   938305
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03540
- NMPDR:   fig|224308.1.peg.355
- GenoList:   BSU03540
- GeneTree:   EBGT00050000000835
- ProtClustDB:   CLSK2752310
- BioCyc:   BSUB:BSU03540-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22034; Mature: 22034

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc366b04)-; HASH(0xcac8ad0)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
ALNLFMNSMLIIVMSVLFTLLLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCC
DLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEEEMNRFKEIILKNTETKKLKF
CEEECHHHHHHHHHHHHEEEEECCCCCEEEECHHHHCCHHHHHHHHHHHHCCCCCHHCCC
KKDQH
CCCCH
>Mature Secondary Structure
MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
ALNLFMNSMLIIVMSVLFTLLLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCC
DLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEEEMNRFKEIILKNTETKKLKF
CEEECHHHHHHHHHHHHEEEEECCCCCEEEECHHHHCCHHHHHHHHHHHHCCCCCHHCCC
KKDQH
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8355609; 8969502; 9384377