Click here to switch to the map view.

The map label for this gene is ycgQ

Identifier: 16077393

GI number: 16077393

Start: 349996

End: 350853

Strand: Reverse

Name: ycgQ

Synonym: BSU03240

Alternate gene names: 16077393

Gene position: 350853-349996 (Counterclockwise)

Preceding gene: 16077394

Following gene: 255767092

Centisome position: 8.32

GC content: 41.14

Gene sequence:

>858_bases
ATGTTTCGTTTATTGGTGCTGATGGGATTTACGTTTTTCTTTTATCATCTGCATGCCTCAGGAAATCTAACAAAATATAT
CAATATGAAATATGCCTATCTTTCCTTTATTGCGATCTTCCTGCTGGCCATTCTGACCGCCGTCCAAGCATATCTATTTA
TCAAGTCGCCTGAAAAAAGCGGACATCACCATGACCATGATTGCGGGTGCGGCCATGATCACGAGCATGACCATGAACAA
AACAAGCCATTTTATCAGCGTTATTTGATTTATGTTGTTTTTCTTTTTCCTTTGGTGTCAGGCATCTTCTTCCCGATTGC
AACGCTTGACTCATCCATAGTCAAAACAAAAGGGTTCTCGTTTAAGGCGATGGAGAGCGGAGATCACTACTCCCAAACAC
AGTATTTGCGGCCTGATGCCAGCCTTTATTACGCGCAAGACAGCTATGACAAACAAATGAAACAGCTGTTTAATAAGTAT
TCCAGCAAAAAAGAGATTTCTCTGACCGATGACGATTTCCTAAAAGGAATGGAAACCATCTATAACTATCCGGGTGAATT
TCTCGGACGGACGATAGAATTTCATGGATTTGCTTACAAAGGAAACGCAATTAACAAAAATCAGCTGTTCGTATTAAGGT
TTGGCATCATTCACTGTATCGCTGATTCCGGCGTGTACGGGATGCTTGTGGAATTTCCGAAGGACATGGACATCAAGGAT
GATGAATGGATTCACATTAAGGGCACTCTGGCCTCAGAATATTACCAGCCATTCAAGTCAACTCTCCCTGTCGTCAAAGT
AACTGACTGGAATACCATTAAAAAACCTGATGATCCGTATGTTTACAGAGGATTTTAA

Upstream 100 bases:

>100_bases
ATGATGCTTGCGGCCTTCAAAAAACGATTTGTTTTCCTGCTGATTACATACATTGTCGTGATTGTTTTAGCGGGATCACT
ACTGGTAAAGGGGTGATTGG

Downstream 100 bases:

>100_bases
GTGAAGACGAAACCAGTACAAGTACTGGTTTCTTTTTTATTTCTTTTTCATCAGCATCAAATCGAGATAGAGCTGGCACC
GCGTTCTGAAATCGCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQ
NKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKY
SSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKD
DEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF

Sequences:

>Translated_285_residues
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQ
NKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKY
SSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKD
DEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
>Mature_285_residues
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQ
NKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKY
SSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKD
DEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0703 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCGQ_BACSU (P94394)

Other databases:

- EMBL:   D50453
- EMBL:   AL009126
- PIR:   D69759
- RefSeq:   NP_388206.1
- ProteinModelPortal:   P94394
- EnsemblBacteria:   EBBACT00000003946
- GeneID:   938334
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03240
- NMPDR:   fig|224308.1.peg.325
- GenoList:   BSU03240
- GeneTree:   EBGT00050000003570
- HOGENOM:   HBG340826
- OMA:   DNPYVYR
- ProtClustDB:   CLSK2301425
- BioCyc:   BSUB:BSU03240-MONOMER
- InterPro:   IPR015402

Pfam domain/function: PF09323 DUF1980

EC number: NA

Molecular weight: Translated: 33207; Mature: 33207

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb476570)-; HASH(0xcec2ff8)-; HASH(0xcb6aa3c)-; HASH(0xc978194)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKS
CHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
FKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETI
EEEECCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH
YNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKD
HCCCHHHHCCEEEECEEEEECCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCC
DEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
CCEEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCH
>Mature Secondary Structure
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKS
CHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
GHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
FKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETI
EEEECCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH
YNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKD
HCCCHHHHCCEEEECEEEEECCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCC
DEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
CCEEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377