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The map label for this gene is yceK

Identifier: 16077366

GI number: 16077366

Start: 320421

End: 320723

Strand: Reverse

Name: yceK

Synonym: BSU02970

Alternate gene names: 16077366

Gene position: 320723-320421 (Counterclockwise)

Preceding gene: 255767079

Following gene: 16077365

Centisome position: 7.61

GC content: 41.58

Gene sequence:

>303_bases
ATGTATTATAGTTTCATGACTATGAAACAATCAGATGATCAAATCAGAGCGCAAATTTTTAAAGCACTGTCTGATGAATC
AAGGCTTGCCATTATTCGTACGCTTTATGTCAGCGGAAAAGAACTCAGCTGCGGTGAAGTAGGTGAAAAGTGCAATATTG
TCAAAACCACGGCATCTTATCATTTTAAAACGCTGCGTGAAGCGGGATTGACGGCAACCCGGAAAGATTCGCGGACAAAA
TACGTCAGTCTGCGTGAAGACACATTTCAAACATACCTGCCTGGCTTTTTGGAAACCCTCTAA

Upstream 100 bases:

>100_bases
CCTTTAGTTGAAAACGCTTTTATTGGAATTGAATTCCTCCTTCCTCTTATGACTTCCTGCTCCTTTACTGGAAAAATAAG
TTGCTTTTTCAACACCCATT

Downstream 100 bases:

>100_bases
CAAAGGGTTTTCTCTATACATATCTGTTTCATAGTTTTAAAGTTATAAAACAATAGGAGTGATAAAATTTGAATCGCATT
TGGCTTTTCTTCAGTGTCAT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSCGEVGEKCNIVKTTASYHFKTLREAGLTATRKDSRTK
YVSLREDTFQTYLPGFLETL

Sequences:

>Translated_100_residues
MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSCGEVGEKCNIVKTTASYHFKTLREAGLTATRKDSRTK
YVSLREDTFQTYLPGFLETL
>Mature_100_residues
MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSCGEVGEKCNIVKTTASYHFKTLREAGLTATRKDSRTK
YVSLREDTFQTYLPGFLETL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEK_BACSU (O34464)

Other databases:

- EMBL:   AB000617
- EMBL:   AL009126
- PIR:   E69757
- RefSeq:   NP_388179.1
- ProteinModelPortal:   O34464
- SMR:   O34464
- EnsemblBacteria:   EBBACT00000001408
- GeneID:   938357
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02970
- NMPDR:   fig|224308.1.peg.298
- GenoList:   BSU02970
- GeneTree:   EBGT00070000032728
- HOGENOM:   HBG742701
- OMA:   YHFKTLR
- ProtClustDB:   CLSK2752306
- BioCyc:   BSUB:BSU02970-MONOMER
- GO:   GO:0005622
- InterPro:   IPR001845
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00778
- SMART:   SM00418

Pfam domain/function: PF01022 HTH_5

EC number: NA

Molecular weight: Translated: 11493; Mature: 11493

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00846 HTH_ARSR_1; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSCGEVGEKCNIVKTTASY
CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEHHEEECCCCCCCCCCCCCCCCEEEEHHHH
HFKTLREAGLTATRKDSRTKYVSLREDTFQTYLPGFLETL
HHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MYYSFMTMKQSDDQIRAQIFKALSDESRLAIIRTLYVSGKELSCGEVGEKCNIVKTTASY
CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEHHEEECCCCCCCCCCCCCCCCEEEEHHHH
HFKTLREAGLTATRKDSRTKYVSLREDTFQTYLPGFLETL
HHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377