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The map label for this gene is ybgF

Identifier: 16077309

GI number: 16077309

Start: 260123

End: 261535

Strand: Reverse

Name: ybgF

Synonym: BSU02400

Alternate gene names: 16077309

Gene position: 261535-260123 (Counterclockwise)

Preceding gene: 16077310

Following gene: 16077305

Centisome position: 6.2

GC content: 49.04

Gene sequence:

>1413_bases
ATGAACTCTGCCCACAACAAGAATGAGACAACCTTTCAGAGAAGTATGAAAAGCCGGCACCTCTTTATGCTTTCCTTGGG
AGGTGTCATCGGAACCGGGCTGTTTTTAAGCTCAGGTTATACCATTCAGCAAGCAGGCCCGGCCGGAACGATACTCGCCT
ACTTAGTCGGGGCCGGCATCGTCTATCTGGTCATGCTATGCCTCGGTGAGCTGTCAGTCGCCATGCCTGTGACCGGCGCC
TTTCACACCTATGCAGCCAAATACATAGGGCCGGGCACCGGATTTACGGTCGCTTGGCTGTATTGGCTGACATGGACCGT
GGCATTGGGATCAGAATTCACAGCAGCCGGCCTGTTAATGCAGCGCTGGTTCCCCCATACATCGGTTTGGATGTGGAGTG
CCGTCTTTGCGCTGTTCATCTTCTTGCTTAACGCATTTTCGGTCAAGTTTTTCGCTGAATCAGAATTTTGGTTTTCCAGC
ATCAAAGTATTAGCCATTGTATTATTTATTCTTTTAGGCGGCTCTGCCATGTTCGGCATCATCCCGATCAAAGGCGGAGA
AGCCGCTCCGATGCTGTCCAACTTCACGGCGGAAGGCGGGCTTTTTCCCAATGGATTTGTCCCGATTTTGATGACGATGC
TGTCCGTCAATTTTGCCTTTTCGGGAACGGAACTAATCGGAATCGCAGCCGGTGAAAGCGTTGATCCTGACAAGACGATA
CCAAAAGCGATAAAAACAACGGTCTGGCGTCTCTCGCTCTTCTTTGTCGGAACAATTTTTGTGCTGTCAGGGCTGATTCC
GATTCAAGATGCAGGTGTCATCAAAAGCCCGTTTGTCGCTGTCTTTGACAGAGTCGGTGTACCATACGCAGCCGATATCA
TGAACTTTGTTATCCTGACAGCGATCCTGTCAGCGGCTAATTCCGGACTCTACGCTTCTTCCCGGATGCTGTGGTCTTTA
TCAAAAGAAAAAACGCTTCATCCGACATTTGCAAAGCTGACGTCAAAAGGAACCCCTTTTAACGCGCTGGTGTTCAGCAT
GATCGGCGGCATTCTGTCGTTGCTGTCCAGCGTATTTGCGCCAGACACTGTATACGTTGTGCTCGTGTCGATTTCCGGTT
TTGCCGTCGTTGTCGTGTGGATGGGAATCGCTGCTTCTCAATTCATGTTCAGAAAACGTTATATCGAAGCGGGAAACAAG
GTTACTGATTTGAAATACAGAACCCCTTTGTATCCGTTCGTGCCGATTGCTGCGTTCCTGTTATGCCTGGCTTCCGTCGT
TGGCATTGCCTTTGATCCGAATCAAAGAATCGCACTCTATTGCGGCGTTCCATTTATGGCCATTTGCTATGCAATATATT
ATGTAAAAAACCGCAAAAGCCAGCCGGCTGCTGATATGACTCATTCAAAATAA

Upstream 100 bases:

>100_bases
ATTCTAACTTAAAGCCGGTTCGCCGGAGTCTCGTGTCACTTTCTGACATGAGATTTTTTATTAGGAAGGAAATAAATCGC
TGATAGAAAGTTGGAAAAAG

Downstream 100 bases:

>100_bases
AAAGAACCTGCCTCCGGGCAGGTTCTTTTTCGATTTTCACACTTCCACTGTCCAGTTAAACGGGCCTTTTACCTTGCCAA
GCTGAATATCTGTTATCGTT

Product: aminoacid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGA
FHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSS
IKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTI
PKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILTAILSAANSGLYASSRMLWSL
SKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNK
VTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK

Sequences:

>Translated_470_residues
MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGA
FHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSS
IKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTI
PKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILTAILSAANSGLYASSRMLWSL
SKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNK
VTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK
>Mature_470_residues
MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGA
FHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSS
IKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTI
PKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILTAILSAANSGLYASSRMLWSL
SKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNK
VTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily

Homologues:

Organism=Homo sapiens, GI33286428, Length=344, Percent_Identity=25.8720930232558, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI258645169, Length=383, Percent_Identity=21.4099216710183, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI71999149, Length=387, Percent_Identity=26.8733850129199, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081708, Length=460, Percent_Identity=63.9130434782609, Blast_Score=610, Evalue=1e-176,
Organism=Escherichia coli, GI1788480, Length=454, Percent_Identity=43.3920704845815, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1786302, Length=462, Percent_Identity=34.8484848484849, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI48994972, Length=464, Percent_Identity=35.7758620689655, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1786789, Length=414, Percent_Identity=38.1642512077295, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1789017, Length=443, Percent_Identity=36.3431151241535, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI87081915, Length=459, Percent_Identity=34.2047930283224, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1786602, Length=459, Percent_Identity=34.2047930283224, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1790653, Length=438, Percent_Identity=33.5616438356164, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI87081869, Length=328, Percent_Identity=23.780487804878, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320772, Length=462, Percent_Identity=31.8181818181818, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6324061, Length=429, Percent_Identity=31.7016317016317, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6322892, Length=411, Percent_Identity=31.8734793187348, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6324553, Length=407, Percent_Identity=30.7125307125307, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321629, Length=480, Percent_Identity=27.9166666666667, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=31.2925170068027, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6324990, Length=479, Percent_Identity=29.0187891440501, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320717, Length=429, Percent_Identity=28.6713286713287, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6319824, Length=484, Percent_Identity=26.2396694214876, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6319543, Length=416, Percent_Identity=28.8461538461538, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6321053, Length=493, Percent_Identity=25.1521298174442, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320251, Length=416, Percent_Identity=27.6442307692308, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6322967, Length=422, Percent_Identity=28.9099526066351, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319542, Length=416, Percent_Identity=27.8846153846154, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6324924, Length=404, Percent_Identity=27.970297029703, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6324981, Length=411, Percent_Identity=31.6301703163017, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6319608, Length=443, Percent_Identity=24.1534988713318, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6320364, Length=544, Percent_Identity=23.8970588235294, Blast_Score=131, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24666159, Length=436, Percent_Identity=22.2477064220184, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221512776, Length=436, Percent_Identity=22.2477064220184, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45550968, Length=481, Percent_Identity=24.7401247401247, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19921172, Length=481, Percent_Identity=24.7401247401247, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221331183, Length=332, Percent_Identity=25, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17647653, Length=332, Percent_Identity=25, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24664379, Length=332, Percent_Identity=25, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBGF_BACSU (O31462)

Other databases:

- EMBL:   AB006424
- EMBL:   AL009126
- PIR:   A69751
- RefSeq:   NP_388122.1
- ProteinModelPortal:   O31462
- EnsemblBacteria:   EBBACT00000002942
- GeneID:   938415
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02400
- NMPDR:   fig|224308.1.peg.241
- GenoList:   BSU02400
- GeneTree:   EBGT00070000031736
- HOGENOM:   HBG492579
- OMA:   GHHEAIM
- PhylomeDB:   O31462
- ProtClustDB:   CLSK886623
- BioCyc:   BSUB:BSU02400-MONOMER
- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840
- PANTHER:   PTHR11785
- PIRSF:   PIRSF006060

Pfam domain/function: PF00324 AA_permease

EC number: NA

Molecular weight: Translated: 50945; Mature: 50945

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb3ce878)-; HASH(0xc34ec78)-; HASH(0xb1467e4)-; HASH(0xb00f308)-; HASH(0xc6671f0)-; HASH(0x40a8b800)-; HASH(0xbe77f54)-; HASH(0xc2a15c4)-; HASH(0xc2a5b58)-; HASH(0xc04cadc)-; HASH(0xc4e0840)-; HASH(0xc3599c4)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGI
CCCCCCCCHHHHHHHHHHCEEEEEEHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
VYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLM
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
QRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSSIKVLAIVLFILLGGSAMFGI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
IPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTI
EEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCEECCCEEEEEECCCCCCCCHHH
PKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
AILSAANSGLYASSRMLWSLSKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFA
HHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNKVTDLKYRTPLYPFVPIAAFL
CCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEECCCCCCHHHHHHHH
LCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK
HHHHHHHCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure
MNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGI
CCCCCCCCHHHHHHHHHHCEEEEEEHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
VYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLM
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
QRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSSIKVLAIVLFILLGGSAMFGI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
IPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTI
EEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCEECCCEEEEEECCCCCCCCHHH
PKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
AILSAANSGLYASSRMLWSLSKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFA
HHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNKVTDLKYRTPLYPFVPIAAFL
CCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEECCCCCCHHHHHHHH
LCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK
HHHHHHHCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377