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The map label for this gene is ybdN

Identifier: 16077273

GI number: 16077273

Start: 224075

End: 224932

Strand: Reverse

Name: ybdN

Synonym: BSU02040

Alternate gene names: 16077273

Gene position: 224932-224075 (Counterclockwise)

Preceding gene: 16077278

Following gene: 16077272

Centisome position: 5.34

GC content: 40.91

Gene sequence:

>858_bases
ATGGTGAAAAAATGGCTTATTCAATTCGCTGTTATGCTTTCTGTCTTATCTACCTTTACGTATTCGGCATCAGCTGTCGG
AGTCACTGCTATCACAGGAAACAATTCATTTGATACCGCAATGCCGATCGGTTATTGGAAATATAAAAATATCGATACAA
CAATACTGGAAGCTGGTCAAGATGAAGCCTATTTCACTTTTACGGCTAATAAGGGAGAAAAAGTATACATGAGGAGTACA
TACCAGAGCGCGTATACAGGGATGAAAATTGAAATTTATGACAAGAACAGAATACCTGTTTCTCAAGGGACAGAAGTTAT
TAACCCTAATACGTTTTCTTCTTTTATTTATGCAAATGCAGACGCCCAAAACACGACGGATACCTTCTATGTGAAAGTGT
CACGAGGCACCTATACTGGAAACATGTACTTTACGCTTTCAATTGAAGACCGAATCAAATCAGGCAGCGGAACGTTCCAA
TTCAGCGGCGTTGCTGAAAATAAAGGAAATACAAGCCTTAGCCCCTCAGGTTCTGACTCCAGCGTGATCAAGGTTGATTT
AACAAACCAATCTGGGATACCGCGTGATGCCATTGTAACCAGAGTTCAAACAACCGCCACTCAAACACCAAGCCAGGGAA
ATACACGCCATCTGATCATGACAAGCGAAAATAACGAATGGAGCCGTGCCCTTGTAAACAGCTCGACTTCAGGGTCTTAT
GATATCTCTTTGTCGGATCAACTCAGTGTGGCAAAGGTATGGAGTTTTAAATATAATACATTAGCGACAGCCAGATCGAC
GATGAGCAACGTAAAAGCAAAAATAGATTATGAATACGACGTGACAAAGCAGTTTTAA

Upstream 100 bases:

>100_bases
TTTTTTATCGGCGAATATAATGTATATATTAACCTCAAAAAACATTTATTTACACCTAAATCGTTATTATGTATGATGGA
AATAAAAGGAGGTTGTTTGC

Downstream 100 bases:

>100_bases
CTTATACCGAGCCGGTTATCCGGCTCTTTTTTATTCTCCGTCTAGAAGGTAAACTATAGTCAGTACAACCAAGGGAAGTG
CAGACATGGCATTAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRST
YQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQ
FSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSY
DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF

Sequences:

>Translated_285_residues
MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRST
YQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQ
FSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSY
DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF
>Mature_285_residues
MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRST
YQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQ
FSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSY
DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBDN_BACSU (O31436)

Other databases:

- EMBL:   AB006424
- EMBL:   AL009126
- PIR:   A69748
- RefSeq:   NP_388086.1
- ProteinModelPortal:   O31436
- EnsemblBacteria:   EBBACT00000001653
- GeneID:   938489
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02040
- NMPDR:   fig|224308.1.peg.205
- GenoList:   BSU02040
- GeneTree:   EBGT00050000001991
- HOGENOM:   HBG345399
- OMA:   GHTYREV
- ProtClustDB:   CLSK872983
- BioCyc:   BSUB:BSU02040-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31503; Mature: 31503

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQ
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCC
DEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANA
CCEEEEEECCCCCEEEEEECHHHHHCCCEEEEEECCCCCHHCCCEEECCCCCCEEEEEEC
DAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDS
CCCCCCEEEEEEEECCEEECEEEEEEEEHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCC
SVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSY
CEEEEEECCCCCCCHHHHHEEEEHHCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEE
DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF
EEEECCCCCEEEEEEEECHHHHHHHHHHHCCEEEEEEEEEEECCC
>Mature Secondary Structure
MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQ
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCC
DEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANA
CCEEEEEECCCCCEEEEEECHHHHHCCCEEEEEECCCCCHHCCCEEECCCCCCEEEEEEC
DAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDS
CCCCCCEEEEEEEECCEEECEEEEEEEEHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCC
SVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSY
CEEEEEECCCCCCCHHHHHEEEEHHCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEE
DISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF
EEEECCCCCEEEEEEEECHHHHHHHHHHHCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377