| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901490
Identifier: 159901490
GI number: 159901490
Start: 6316057
End: 6316533
Strand: Direct
Name: 159901490
Synonym: Haur_4979
Alternate gene names: NA
Gene position: 6316057-6316533 (Clockwise)
Preceding gene: 159901489
Following gene: 159901491
Centisome position: 99.52
GC content: 50.1
Gene sequence:
>477_bases ATGGGTCAGAGCATCACCAGTGCTACGCTCGATTTTGTAATCTTGCTCTTACGAATTAGCGTGATCTTTTTCTTGTACTT CTTTTTGTACCAGGTAGTACGGGTTATTCGGCGCGAATTGCAGGTAGTTGGCACAGGAACTGGTGGTGCGGGCGTGCTGG CGGGAGCGGCGCAAAATTTATATGGCAAACTGATTGTCATGTCGAGTGGCGATACTGGTTTGCAGCGTGGCTATGCCTTT GAGCTTGGCGCGGTCAATATGATTGGGCGGCGGCCTGATAGCGATGTGGCCCTGAACGACTCATTTTTATCCTCGGAGCA TGCCCTGTTGGAGTGGCGTGGTGATAGCTGGTGGCTTGAAGATCAGCGCTCAACCAACGGCACCTTTATTAATGATATTG AAGTAGCTGATCCAACGCCAATTGTCTATGGCGACATCATTCGGATTGGGCGGATCGAGCTCAAACTTTCACGTTAA
Upstream 100 bases:
>100_bases CGGAACCTTTGTCAATGGTGATCCGGTGCAAGAACGGGAACTGCGCAACGGCGATATTGTGTCGCTCGGCGGCTTGGAAT TGCGTTTTGAGGAGGCCTAA
Downstream 100 bases:
>100_bases CTCTGATCAGCAGCATTGACAATAGCTTGATGCTGCTGCCCCTTTTTTAGCCCCTAAAACCCGCAGTTACAGCGTTTGCA ACCAACCCAGATGAGAACTT
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Signaling Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGQSITSATLDFVILLLRISVIFFLYFFLYQVVRVIRRELQVVGTGTGGAGVLAGAAQNLYGKLIVMSSGDTGLQRGYAF ELGAVNMIGRRPDSDVALNDSFLSSEHALLEWRGDSWWLEDQRSTNGTFINDIEVADPTPIVYGDIIRIGRIELKLSR
Sequences:
>Translated_158_residues MGQSITSATLDFVILLLRISVIFFLYFFLYQVVRVIRRELQVVGTGTGGAGVLAGAAQNLYGKLIVMSSGDTGLQRGYAF ELGAVNMIGRRPDSDVALNDSFLSSEHALLEWRGDSWWLEDQRSTNGTFINDIEVADPTPIVYGDIIRIGRIELKLSR >Mature_157_residues GQSITSATLDFVILLLRISVIFFLYFFLYQVVRVIRRELQVVGTGTGGAGVLAGAAQNLYGKLIVMSSGDTGLQRGYAFE LGAVNMIGRRPDSDVALNDSFLSSEHALLEWRGDSWWLEDQRSTNGTFINDIEVADPTPIVYGDIIRIGRIELKLSR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17474; Mature: 17343
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQSITSATLDFVILLLRISVIFFLYFFLYQVVRVIRRELQVVGTGTGGAGVLAGAAQNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCC YGKLIVMSSGDTGLQRGYAFELGAVNMIGRRPDSDVALNDSFLSSEHALLEWRGDSWWLE CEEEEEEECCCCCHHCCEEEECCCCCCCCCCCCCCEEECCHHHCCCCEEEEECCCCEEEC DQRSTNGTFINDIEVADPTPIVYGDIIRIGRIELKLSR CCCCCCCCEEEEEECCCCCCEEECCEEEEEEEEEEECC >Mature Secondary Structure GQSITSATLDFVILLLRISVIFFLYFFLYQVVRVIRRELQVVGTGTGGAGVLAGAAQNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCC YGKLIVMSSGDTGLQRGYAFELGAVNMIGRRPDSDVALNDSFLSSEHALLEWRGDSWWLE CEEEEEEECCCCCHHCCEEEECCCCCCCCCCCCCCEEECCHHHCCCCEEEEECCCCEEEC DQRSTNGTFINDIEVADPTPIVYGDIIRIGRIELKLSR CCCCCCCCEEEEEECCCCCCEEECCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA