| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is sphX [H]
Identifier: 159901417
GI number: 159901417
Start: 6243022
End: 6244095
Strand: Direct
Name: sphX [H]
Synonym: Haur_4906
Alternate gene names: 159901417
Gene position: 6243022-6244095 (Clockwise)
Preceding gene: 159901416
Following gene: 159901418
Centisome position: 98.37
GC content: 53.17
Gene sequence:
>1074_bases GTGCTACAACGATTTTTTTTGCTTTGCTGCCTCGTAACGTTGGCTGGATGTGGTGCAACTGCCGCCCAACCGACGGCTAC AAGCCTCCCCGCGACAGCAACACCCGCACCAACCACCCTCGCTCAAGCAACTCCTGCAGTAACGGCGAATCCAGCTTTGC GCGGCACAATCGTGATCGATGGCTCTAGCACGGTGTTTCCAATTACTGAGGCAGTTGCCCGTGAGTTTGCCCTGACTGCG CCGAATGTTCAAGTGCAATTGGGCGTGAGCGGCACTGGTGGCGGGTTTAAGAAGTTTTGTGCTGGCGAAACGGTGATCTC CGATGCTTCACGCCCAATCAAGCAGAGCGAAGCCGCCGAGTGTGCCGCCAACCAGATTGATTTTGTGGAAATTCCGGTGG CCTTCGATGGCCTCTCGTTGGTTGCCAACCCCAGCAATACATGGCTCGAATGTATGACCGTGGCCGAATTGAACACGCTC TGGCAGCCGGATGCGACCAATATTATTACCAATTGGCGTATGTTGCGACCCATTTGGCCAACCAGTACCTTGCAATTGTA TGGCGCGGGTCAAGATTCAGGCACCTTCGATTATTTCACCAGCGCAATTGTTGGAACTGAGGGTTCCAGCCGTAGCGACG TGATTAGCAGCGAAGACGATTATCTGATTGCTCAGGATATTGCGGGCGACCCCAATGCTTTGGGCTATTTTGGTTATGCC TACTATCGCGAATATCAAGAACGCCTGAAACTAATTGCGGTCGATGCTGGCAATGGTTGCGTCCTGCCTTCTGAGCAAAC GATTGCTGATGGCTCGTATCAACCACTTTCGCGGCCAATTTTCATTTATGTCCGCGCCGATGCCTTAGATCGGGCTGAAG TGGCGGCGTTTGTTGATTTTTATCTCAGTGATTTGGCGCGGGTGGTGGCTGACGTGAAATATGTGCCCTTGCCAGCCCGG GCCTATCAATTTGCCCAAGAGCGCGTGCAACAACGCAAACTTGGCTCGTTGTTCGAGGGTGGTTCGCAAATCGGGGTTTC GATCGAACGCTTGCTTGAGCTAGAAGGACAATAA
Upstream 100 bases:
>100_bases ATTCACTACATAGATTTTTGAGATTCTTAACCTCGATATGACCAACACTTAACAATTGGCAACTACCCTACAAGCTGTAT AGTTTGTGGAGTGTTGGGCT
Downstream 100 bases:
>100_bases GCGATGCGGCTTTCTTTTCGCACAAAATTGCTTGGCTCAATTGCCCTCGACTTGGCCTTGATGATCGCCTTGGGTGTTTT TGCGTTAAACGGCTTTAGCA
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MLQRFFLLCCLVTLAGCGATAAQPTATSLPATATPAPTTLAQATPAVTANPALRGTIVIDGSSTVFPITEAVAREFALTA PNVQVQLGVSGTGGGFKKFCAGETVISDASRPIKQSEAAECAANQIDFVEIPVAFDGLSLVANPSNTWLECMTVAELNTL WQPDATNIITNWRMLRPIWPTSTLQLYGAGQDSGTFDYFTSAIVGTEGSSRSDVISSEDDYLIAQDIAGDPNALGYFGYA YYREYQERLKLIAVDAGNGCVLPSEQTIADGSYQPLSRPIFIYVRADALDRAEVAAFVDFYLSDLARVVADVKYVPLPAR AYQFAQERVQQRKLGSLFEGGSQIGVSIERLLELEGQ
Sequences:
>Translated_357_residues MLQRFFLLCCLVTLAGCGATAAQPTATSLPATATPAPTTLAQATPAVTANPALRGTIVIDGSSTVFPITEAVAREFALTA PNVQVQLGVSGTGGGFKKFCAGETVISDASRPIKQSEAAECAANQIDFVEIPVAFDGLSLVANPSNTWLECMTVAELNTL WQPDATNIITNWRMLRPIWPTSTLQLYGAGQDSGTFDYFTSAIVGTEGSSRSDVISSEDDYLIAQDIAGDPNALGYFGYA YYREYQERLKLIAVDAGNGCVLPSEQTIADGSYQPLSRPIFIYVRADALDRAEVAAFVDFYLSDLARVVADVKYVPLPAR AYQFAQERVQQRKLGSLFEGGSQIGVSIERLLELEGQ >Mature_357_residues MLQRFFLLCCLVTLAGCGATAAQPTATSLPATATPAPTTLAQATPAVTANPALRGTIVIDGSSTVFPITEAVAREFALTA PNVQVQLGVSGTGGGFKKFCAGETVISDASRPIKQSEAAECAANQIDFVEIPVAFDGLSLVANPSNTWLECMTVAELNTL WQPDATNIITNWRMLRPIWPTSTLQLYGAGQDSGTFDYFTSAIVGTEGSSRSDVISSEDDYLIAQDIAGDPNALGYFGYA YYREYQERLKLIAVDAGNGCVLPSEQTIADGSYQPLSRPIFIYVRADALDRAEVAAFVDFYLSDLARVVADVKYVPLPAR AYQFAQERVQQRKLGSLFEGGSQIGVSIERLLELEGQ
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38270; Mature: 38270
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRFFLLCCLVTLAGCGATAAQPTATSLPATATPAPTTLAQATPAVTANPALRGTIVID CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEC GSSTVFPITEAVAREFALTAPNVQVQLGVSGTGGGFKKFCAGETVISDASRPIKQSEAAE CCCCEEHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHHHCCCHHHHCCCCCCHHHHHHH CAANQIDFVEIPVAFDGLSLVANPSNTWLECMTVAELNTLWQPDATNIITNWRMLRPIWP HHHCCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCC TSTLQLYGAGQDSGTFDYFTSAIVGTEGSSRSDVISSEDDYLIAQDIAGDPNALGYFGYA CCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHH YYREYQERLKLIAVDAGNGCVLPSEQTIADGSYQPLSRPIFIYVRADALDRAEVAAFVDF HHHHHHHHEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH YLSDLARVVADVKYVPLPARAYQFAQERVQQRKLGSLFEGGSQIGVSIERLLELEGQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCC >Mature Secondary Structure MLQRFFLLCCLVTLAGCGATAAQPTATSLPATATPAPTTLAQATPAVTANPALRGTIVID CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEC GSSTVFPITEAVAREFALTAPNVQVQLGVSGTGGGFKKFCAGETVISDASRPIKQSEAAE CCCCEEHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHHHCCCHHHHCCCCCCHHHHHHH CAANQIDFVEIPVAFDGLSLVANPSNTWLECMTVAELNTLWQPDATNIITNWRMLRPIWP HHHCCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCC TSTLQLYGAGQDSGTFDYFTSAIVGTEGSSRSDVISSEDDYLIAQDIAGDPNALGYFGYA CCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHH YYREYQERLKLIAVDAGNGCVLPSEQTIADGSYQPLSRPIFIYVRADALDRAEVAAFVDF HHHHHHHHEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH YLSDLARVVADVKYVPLPARAYQFAQERVQQRKLGSLFEGGSQIGVSIERLLELEGQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]