| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901408
Identifier: 159901408
GI number: 159901408
Start: 6234850
End: 6235332
Strand: Reverse
Name: 159901408
Synonym: Haur_4897
Alternate gene names: NA
Gene position: 6235332-6234850 (Counterclockwise)
Preceding gene: 159901410
Following gene: 159901407
Centisome position: 98.25
GC content: 49.69
Gene sequence:
>483_bases ATGTTTCTGATTTTGCATATTATGGGGGCGGTCTTAGCACTTGGCACTGGCTTGGCGGCCCATCGCTGGCCCAACGGCAC AACCACCCATCGTTGGATTGGCAAAGGCTATTTATTGGGATGGGTAACCCTCTTCAGTACAGGCATCGTCATTAGTCGGG CAGGAGTTAGTGCGCCCGATGTCCTGAATGGATTGGGAATGGTCTCGGCAACCTTTGCCTATAGCGTGATTTTCTTTCGC AAACGCTTAGGGCGACGCTGGCTACGCCTACACTATCAATGGATGACCCAATCGTATGCCTTTGTGTGTGTCGCAACCCT CAACCAAATTATTGCCCGTAGTGGCATTGAGATTACATTCTGGATTTTCGCGGCTGAAGTTTCTTTACCCTTCTTCATTC TGCCTTATGTGGGTCGCAAGCTTGATCAACGCTATGGTTTTGCCCCTAAATCCAAGCCATTGGGCAATACAGCAAGCAAC TAG
Upstream 100 bases:
>100_bases ATCTAGTTTGGTTGTAACACTTAGTACTGATGGCCTAGCACGCGCACATTGCTAAACTCCAGTCATTGGAATTAGGCTTC TTTACTGGTGAGGTGTGGCA
Downstream 100 bases:
>100_bases GCTCAATAATTATCAAATAACGATTGGCTTTTAGCTGGGCGCTAGAAGCCAACGATGCTATAGTATGAGCAGATTTAGGT GAGTAGCTGGTTTATGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MFLILHIMGAVLALGTGLAAHRWPNGTTTHRWIGKGYLLGWVTLFSTGIVISRAGVSAPDVLNGLGMVSATFAYSVIFFR KRLGRRWLRLHYQWMTQSYAFVCVATLNQIIARSGIEITFWIFAAEVSLPFFILPYVGRKLDQRYGFAPKSKPLGNTASN
Sequences:
>Translated_160_residues MFLILHIMGAVLALGTGLAAHRWPNGTTTHRWIGKGYLLGWVTLFSTGIVISRAGVSAPDVLNGLGMVSATFAYSVIFFR KRLGRRWLRLHYQWMTQSYAFVCVATLNQIIARSGIEITFWIFAAEVSLPFFILPYVGRKLDQRYGFAPKSKPLGNTASN >Mature_160_residues MFLILHIMGAVLALGTGLAAHRWPNGTTTHRWIGKGYLLGWVTLFSTGIVISRAGVSAPDVLNGLGMVSATFAYSVIFFR KRLGRRWLRLHYQWMTQSYAFVCVATLNQIIARSGIEITFWIFAAEVSLPFFILPYVGRKLDQRYGFAPKSKPLGNTASN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17870; Mature: 17870
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLILHIMGAVLALGTGLAAHRWPNGTTTHRWIGKGYLLGWVTLFSTGIVISRAGVSAPD CCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCHHEEECCCCCHH VLNGLGMVSATFAYSVIFFRKRLGRRWLRLHYQWMTQSYAFVCVATLNQIIARSGIEITF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE WIFAAEVSLPFFILPYVGRKLDQRYGFAPKSKPLGNTASN EEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFLILHIMGAVLALGTGLAAHRWPNGTTTHRWIGKGYLLGWVTLFSTGIVISRAGVSAPD CCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCHHEEECCCCCHH VLNGLGMVSATFAYSVIFFRKRLGRRWLRLHYQWMTQSYAFVCVATLNQIIARSGIEITF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE WIFAAEVSLPFFILPYVGRKLDQRYGFAPKSKPLGNTASN EEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA