| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901401
Identifier: 159901401
GI number: 159901401
Start: 6226071
End: 6226628
Strand: Direct
Name: 159901401
Synonym: Haur_4890
Alternate gene names: NA
Gene position: 6226071-6226628 (Clockwise)
Preceding gene: 159901400
Following gene: 159901402
Centisome position: 98.1
GC content: 41.4
Gene sequence:
>558_bases ATGCCATTTGTAGACATTCTGTTGCTGCTTTTCGTTGTGTTAGGGTTGTTCTATGGCTTTTTTCAAGGCATGCTGAAGGT TGGAATTTCCATTCTCGTGTTCTACCTAACAATCGTGCTTTCGTCGCTCTACTATCGGCCATTAGCCTTGGCGATCAGCA AAAATTCGACGACACCGTTCCAAGTTTTGGAAATGTTATCATTTTTGACCTTATTGTTCGTGTTGTTTTTTGCTTTGCTT TGGGTTGCAAGCTATACCTTTCGTTATCTCAAAGTTGGTGGTCAACTTCAATATATCGATAAGGTGATTGGCACATTCCT AGGGTTAATTCTTGGGGCGATGATTGCCAGTATTTTTGCAATGATGTTGCGCTATTTATTTTCGACAACTGCTCCAGCAG TGCTTGATTATCCGGCAATGCGGTTTTTACAGGCTAGTACACGGGCATCGGCGCTTAAGAATGTATTTTTAGATATTATC TTGCCGCTGATTTATGGGCCAATTCGCCCAATTATGCCTGAAAGTGCTGATGCATTATTCCGTAGTATTCAACGGTAA
Upstream 100 bases:
>100_bases CTATAATACGCCCATCGCGCTTTGGCCACCCATGATCCAAGAACATCCACGGATTTTCCGCGATGTTTTGGCTCTGCGTG GGTAGATGAGGTACTTGCTC
Downstream 100 bases:
>100_bases TCGGGCGGTGCTGGCGCACTTGCAATAGAAGAAGTTTCGTGATGATATCAGAAGTTGTACTCCAAACCCTTGAGTTCGAT AAAGTTCGTGATCAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPFVDILLLLFVVLGLFYGFFQGMLKVGISILVFYLTIVLSSLYYRPLALAISKNSTTPFQVLEMLSFLTLLFVLFFALL WVASYTFRYLKVGGQLQYIDKVIGTFLGLILGAMIASIFAMMLRYLFSTTAPAVLDYPAMRFLQASTRASALKNVFLDII LPLIYGPIRPIMPESADALFRSIQR
Sequences:
>Translated_185_residues MPFVDILLLLFVVLGLFYGFFQGMLKVGISILVFYLTIVLSSLYYRPLALAISKNSTTPFQVLEMLSFLTLLFVLFFALL WVASYTFRYLKVGGQLQYIDKVIGTFLGLILGAMIASIFAMMLRYLFSTTAPAVLDYPAMRFLQASTRASALKNVFLDII LPLIYGPIRPIMPESADALFRSIQR >Mature_184_residues PFVDILLLLFVVLGLFYGFFQGMLKVGISILVFYLTIVLSSLYYRPLALAISKNSTTPFQVLEMLSFLTLLFVLFFALLW VASYTFRYLKVGGQLQYIDKVIGTFLGLILGAMIASIFAMMLRYLFSTTAPAVLDYPAMRFLQASTRASALKNVFLDIIL PLIYGPIRPIMPESADALFRSIQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20869; Mature: 20737
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVDILLLLFVVLGLFYGFFQGMLKVGISILVFYLTIVLSSLYYRPLALAISKNSTTPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QVLEMLSFLTLLFVLFFALLWVASYTFRYLKVGGQLQYIDKVIGTFLGLILGAMIASIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MMLRYLFSTTAPAVLDYPAMRFLQASTRASALKNVFLDIILPLIYGPIRPIMPESADALF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RSIQR HHHCC >Mature Secondary Structure PFVDILLLLFVVLGLFYGFFQGMLKVGISILVFYLTIVLSSLYYRPLALAISKNSTTPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QVLEMLSFLTLLFVLFFALLWVASYTFRYLKVGGQLQYIDKVIGTFLGLILGAMIASIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MMLRYLFSTTAPAVLDYPAMRFLQASTRASALKNVFLDIILPLIYGPIRPIMPESADALF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RSIQR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA