| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901352
Identifier: 159901352
GI number: 159901352
Start: 6170218
End: 6170514
Strand: Reverse
Name: 159901352
Synonym: Haur_4841
Alternate gene names: NA
Gene position: 6170514-6170218 (Counterclockwise)
Preceding gene: 159901353
Following gene: 159901347
Centisome position: 97.23
GC content: 51.52
Gene sequence:
>297_bases ATGACAATTGAATTTTGGAGCTGGCTGGTTAGTGGCTTGGTGCTGCTTGGTTGTGGCATTTTAGCGTGGCAGATCAGCAA TGGTCGGCGGCGGCGCATGATTACGTTTGTGCTCTATGCCGGGTTATTTGGGCTTAATTTGGCTGGGGTTGAATTTATTG CGCGGGGGCTTGATCAACTGCTTGGCTCGTGGTTGACGGTCAGCCCAAACAACCTAGCCCGTTTGCGGCTTGGTTTTGCA GGCATTTGGCTCGTTGCAATCGTTTTTGGGTTGCAGCGTGTGCGCAAATATTCCTAG
Upstream 100 bases:
>100_bases CATAATCTACGCGTTCGGCACAATGGTGTGATTATTTTCCCGCTTAAATTCCTCATGCTATACTTCCCCTCAAATTAGGT TGTTCATTTAAGGTAGCGTT
Downstream 100 bases:
>100_bases CGCCGAACTCCCGAAGCTAATTCTTGGCGTTTATATTTGCAATGATCGCAAAAATAAACCCGATAGCCTGCCAACATCAC TTGCTCTAATAACCGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTIEFWSWLVSGLVLLGCGILAWQISNGRRRRMITFVLYAGLFGLNLAGVEFIARGLDQLLGSWLTVSPNNLARLRLGFA GIWLVAIVFGLQRVRKYS
Sequences:
>Translated_98_residues MTIEFWSWLVSGLVLLGCGILAWQISNGRRRRMITFVLYAGLFGLNLAGVEFIARGLDQLLGSWLTVSPNNLARLRLGFA GIWLVAIVFGLQRVRKYS >Mature_97_residues TIEFWSWLVSGLVLLGCGILAWQISNGRRRRMITFVLYAGLFGLNLAGVEFIARGLDQLLGSWLTVSPNNLARLRLGFAG IWLVAIVFGLQRVRKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10999; Mature: 10868
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEFWSWLVSGLVLLGCGILAWQISNGRRRRMITFVLYAGLFGLNLAGVEFIARGLDQL CCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGSWLTVSPNNLARLRLGFAGIWLVAIVFGLQRVRKYS HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIEFWSWLVSGLVLLGCGILAWQISNGRRRRMITFVLYAGLFGLNLAGVEFIARGLDQL CHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGSWLTVSPNNLARLRLGFAGIWLVAIVFGLQRVRKYS HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA