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The map label for this gene is uidR [C]

Identifier: 159901347

GI number: 159901347

Start: 6165838

End: 6166419

Strand: Reverse

Name: uidR [C]

Synonym: Haur_4836

Alternate gene names: 159901347

Gene position: 6166419-6165838 (Counterclockwise)

Preceding gene: 159901352

Following gene: 159901346

Centisome position: 97.16

GC content: 51.2

Gene sequence:

>582_bases
ATGATGACTGATGATTTAAAATCTCCCAAAAAACCCTCGGCGCAACGATCTGATGCGCAACAAAACCATGGTCGGATTAT
GGCGGCGGCCAAAGCGCGGTTTGCTAGCGATGGGCCAAGCGCCGCCATGGATGCGATCGCTCGTGATGCAGGCGTGGCGG
TTGGTACGCTCTATCATCATTTTGGCTCTAAAGAAGGCCTTTTGAATTTGGTGATTCAGGAGCATTTTCAGGTAGTAACT
GATTTTCTGGCGAGCTTACAAGATTCGGCTGATCCTTGGTGGGCAGTCGAGCAGGTAGTGCGGGGCATGGCTAAACGCCA
AATCAAAGATCGAGCCTTTAAAACCATGATTCACCAACATAGCAATTTGATTGAAACCACCAGCCAAGCCAAACGCGGCA
TTGATCCAGCGATTCAAGCCTTGATTGATCGTGCGCAAGCGGCTGGTTTGGTGCGGCCAGATTTACGCGCTGGCGATTTA
TCGGCCTTGTTGGCGGGCCTGCCAATCGGCGACGATCAAGCTGAGCAACGCGAACGCTACCTCTTGATTGTGTTGCAGGG
GATCAAAAGTGAAAACGCATAA

Upstream 100 bases:

>100_bases
AATCCTTTCGTTTGGGTCTATGCTATACTTGTTGAATATGTTGAATTGACGTTCAACTTGATTATATTGAACTATGGTTC
AATTTGTCAAGAGGTAATTA

Downstream 100 bases:

>100_bases
GCATGTATAATGGGGCGGGCAGACTCCATTTGCTGAGTTTGCCGTTGAATTTGCTTGCTCAACAACGCATGAAGGAGCGT
TTTCAATGCAATACGGCACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR-Type Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Transcription Regulator Protein Tetr Family; Transcription Regulator; Tetr Family Transcriptional Regulator; TetR Family Protein Transcriptional Regulator

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MMTDDLKSPKKPSAQRSDAQQNHGRIMAAAKARFASDGPSAAMDAIARDAGVAVGTLYHHFGSKEGLLNLVIQEHFQVVT
DFLASLQDSADPWWAVEQVVRGMAKRQIKDRAFKTMIHQHSNLIETTSQAKRGIDPAIQALIDRAQAAGLVRPDLRAGDL
SALLAGLPIGDDQAEQRERYLLIVLQGIKSENA

Sequences:

>Translated_193_residues
MMTDDLKSPKKPSAQRSDAQQNHGRIMAAAKARFASDGPSAAMDAIARDAGVAVGTLYHHFGSKEGLLNLVIQEHFQVVT
DFLASLQDSADPWWAVEQVVRGMAKRQIKDRAFKTMIHQHSNLIETTSQAKRGIDPAIQALIDRAQAAGLVRPDLRAGDL
SALLAGLPIGDDQAEQRERYLLIVLQGIKSENA
>Mature_193_residues
MMTDDLKSPKKPSAQRSDAQQNHGRIMAAAKARFASDGPSAAMDAIARDAGVAVGTLYHHFGSKEGLLNLVIQEHFQVVT
DFLASLQDSADPWWAVEQVVRGMAKRQIKDRAFKTMIHQHSNLIETTSQAKRGIDPAIQALIDRAQAAGLVRPDLRAGDL
SALLAGLPIGDDQAEQRERYLLIVLQGIKSENA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21019; Mature: 21019

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTDDLKSPKKPSAQRSDAQQNHGRIMAAAKARFASDGPSAAMDAIARDAGVAVGTLYHH
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FGSKEGLLNLVIQEHFQVVTDFLASLQDSADPWWAVEQVVRGMAKRQIKDRAFKTMIHQH
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLIETTSQAKRGIDPAIQALIDRAQAAGLVRPDLRAGDLSALLAGLPIGDDQAEQRERY
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LLIVLQGIKSENA
HHHHEECCCCCCC
>Mature Secondary Structure
MMTDDLKSPKKPSAQRSDAQQNHGRIMAAAKARFASDGPSAAMDAIARDAGVAVGTLYHH
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FGSKEGLLNLVIQEHFQVVTDFLASLQDSADPWWAVEQVVRGMAKRQIKDRAFKTMIHQH
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLIETTSQAKRGIDPAIQALIDRAQAAGLVRPDLRAGDLSALLAGLPIGDDQAEQRERY
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LLIVLQGIKSENA
HHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA