| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901341
Identifier: 159901341
GI number: 159901341
Start: 6158223
End: 6159584
Strand: Direct
Name: 159901341
Synonym: Haur_4830
Alternate gene names: NA
Gene position: 6158223-6159584 (Clockwise)
Preceding gene: 159901340
Following gene: 159901342
Centisome position: 97.03
GC content: 50.59
Gene sequence:
>1362_bases ATGTTAGAGCAAGCGATTCGTGATTATCACGCCCTCCTCACGCCCGATCTCGCTCGTGCTTCTCAAGAACGTCTCACCAA CCTACAACAGCAACAAAATCTCTTTTTTGGCACCCGTCCGTTGTGCAATGTGCTACGCCCACATTTTCTCAGCGTCGAGC AATCGAGCTTGATCGAGCGCGTCTCGCAGTTGGTGGCCGAAGCATCGCGCACGGTGGTTGAGTATGCTTTGCGCACGCCT GAGGTGCTCGATCTGCTGGCCTTGACCGAGGGTGAACATCAATTAATTAGTTACGAGCCTGGCTACCGTGAATTAAGCGT TTCTTCACGGCTTGATTCATTTTTAACCAGTGATAGTAGCTCGTTTCAATTTGTTGAATATAACGCCGAAAGCCCCGCCG CAATCGCCTACGAAGATATTCTTTCGCAGGTGTTCGAGCAATTGCCGATTATGCAAGAGTTTCAGCGCCATTATCGGGTT GAAAGTTTGCCTGCTCGGCAACGCTTGTTAGAAGCTTTTTTGGCGGTTTATCGCGAATGGGGTGGCACAGGCGAGCCAAA AATTGCCATTGTCGATTGGCATGGCCTGCCGACGCTCTCGGAATTTCAACTATTTCAGCAATATTTTGCTGAGCATGGCT TGAAAACGGTGATTTGTGCGCCGGAAGATTTGCGCTATCAGGCTGGCACGCTGTATGCCAATAACACACCAGTTAATTTT GTCTATAAACGCTTGTTGACAACCGAATTTTTGCAGCGTTTGGGCAATGAAGCCTTTGATCATCCATTAACTCAGGCCTA CCGTGATGGAGCAATTTGTTTGGCCAATAATTTTCGCGCCAAATTGCTGCACAAAAAAATGATCTTTGGCTTGTTATCTG ATCCGGCGATCACTAGCGCCGCTGGAATTAGCTCAGCCACCCAGCAACAGCTGGCCCAGCACATTCCTTGGACGCGGCGA GTGACGGCTGGCCGCACCGATTATGCTGGCACAGAAGTTGACCTACTCGATTTTATTCGGCAAAACCGTGATCGACTGTT GCTCAAGCCCAACGACGATTATGGCGGCCACGGGATTACGATTGGTTGGGAAACCGAGGCCGAAGCTTGGGATTTGGCGC TACAGCAGGCCTTAACTGAGCCATTTGTGGTGCAAGAGCGCGTAGTGATTGCCTACGAGGATTATCCAGCTATGGTGGAT GGTCAATTGCAGATCGGCCAGCGCTTGGTCGATACCGATCCATTTTTATTTGGCAGCGAAGTTCAAGGCTGTCTGACGCG CTTATCGACGGTGACGTTGCTGAATGTGACCGCCGGCGGCGGCTCGACCACACCAACGTTTCAGCTCTCTAAACTGAGCT AA
Upstream 100 bases:
>100_bases TTGTTAATGCTATGAACCATTACAGCTACAAGCCAGCGAACATAGCTCATTTAAAGAAGACCTTTGGCTATGTTCGCTGT TGCTATTCATGGAGCGGCCT
Downstream 100 bases:
>100_bases ATCTCACCATAGACAAGCGCAAAAACATCAACTATGCTAAAGGGCAATACCACTGGCAGCAACCCACCCAACGCCCACTA TCAACTGACACACCAACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MLEQAIRDYHALLTPDLARASQERLTNLQQQQNLFFGTRPLCNVLRPHFLSVEQSSLIERVSQLVAEASRTVVEYALRTP EVLDLLALTEGEHQLISYEPGYRELSVSSRLDSFLTSDSSSFQFVEYNAESPAAIAYEDILSQVFEQLPIMQEFQRHYRV ESLPARQRLLEAFLAVYREWGGTGEPKIAIVDWHGLPTLSEFQLFQQYFAEHGLKTVICAPEDLRYQAGTLYANNTPVNF VYKRLLTTEFLQRLGNEAFDHPLTQAYRDGAICLANNFRAKLLHKKMIFGLLSDPAITSAAGISSATQQQLAQHIPWTRR VTAGRTDYAGTEVDLLDFIRQNRDRLLLKPNDDYGGHGITIGWETEAEAWDLALQQALTEPFVVQERVVIAYEDYPAMVD GQLQIGQRLVDTDPFLFGSEVQGCLTRLSTVTLLNVTAGGGSTTPTFQLSKLS
Sequences:
>Translated_453_residues MLEQAIRDYHALLTPDLARASQERLTNLQQQQNLFFGTRPLCNVLRPHFLSVEQSSLIERVSQLVAEASRTVVEYALRTP EVLDLLALTEGEHQLISYEPGYRELSVSSRLDSFLTSDSSSFQFVEYNAESPAAIAYEDILSQVFEQLPIMQEFQRHYRV ESLPARQRLLEAFLAVYREWGGTGEPKIAIVDWHGLPTLSEFQLFQQYFAEHGLKTVICAPEDLRYQAGTLYANNTPVNF VYKRLLTTEFLQRLGNEAFDHPLTQAYRDGAICLANNFRAKLLHKKMIFGLLSDPAITSAAGISSATQQQLAQHIPWTRR VTAGRTDYAGTEVDLLDFIRQNRDRLLLKPNDDYGGHGITIGWETEAEAWDLALQQALTEPFVVQERVVIAYEDYPAMVD GQLQIGQRLVDTDPFLFGSEVQGCLTRLSTVTLLNVTAGGGSTTPTFQLSKLS >Mature_453_residues MLEQAIRDYHALLTPDLARASQERLTNLQQQQNLFFGTRPLCNVLRPHFLSVEQSSLIERVSQLVAEASRTVVEYALRTP EVLDLLALTEGEHQLISYEPGYRELSVSSRLDSFLTSDSSSFQFVEYNAESPAAIAYEDILSQVFEQLPIMQEFQRHYRV ESLPARQRLLEAFLAVYREWGGTGEPKIAIVDWHGLPTLSEFQLFQQYFAEHGLKTVICAPEDLRYQAGTLYANNTPVNF VYKRLLTTEFLQRLGNEAFDHPLTQAYRDGAICLANNFRAKLLHKKMIFGLLSDPAITSAAGISSATQQQLAQHIPWTRR VTAGRTDYAGTEVDLLDFIRQNRDRLLLKPNDDYGGHGITIGWETEAEAWDLALQQALTEPFVVQERVVIAYEDYPAMVD GQLQIGQRLVDTDPFLFGSEVQGCLTRLSTVTLLNVTAGGGSTTPTFQLSKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51058; Mature: 51058
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQAIRDYHALLTPDLARASQERLTNLQQQQNLFFGTRPLCNVLRPHFLSVEQSSLIER CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCHHHHHHHH VSQLVAEASRTVVEYALRTPEVLDLLALTEGEHQLISYEPGYRELSVSSRLDSFLTSDSS HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHEEHHHHHHHHHCCCCC SFQFVEYNAESPAAIAYEDILSQVFEQLPIMQEFQRHYRVESLPARQRLLEAFLAVYREW CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GGTGEPKIAIVDWHGLPTLSEFQLFQQYFAEHGLKTVICAPEDLRYQAGTLYANNTPVNF CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCEEEECCCCHHH VYKRLLTTEFLQRLGNEAFDHPLTQAYRDGAICLANNFRAKLLHKKMIFGLLSDPAITSA HHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHH AGISSATQQQLAQHIPWTRRVTAGRTDYAGTEVDLLDFIRQNRDRLLLKPNDDYGGHGIT HCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEE IGWETEAEAWDLALQQALTEPFVVQERVVIAYEDYPAMVDGQLQIGQRLVDTDPFLFGSE EEECCCHHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEECHH VQGCLTRLSTVTLLNVTAGGGSTTPTFQLSKLS HHHHHHHHHHEEEEEEECCCCCCCCCEEECCCC >Mature Secondary Structure MLEQAIRDYHALLTPDLARASQERLTNLQQQQNLFFGTRPLCNVLRPHFLSVEQSSLIER CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCHHHHHHHH VSQLVAEASRTVVEYALRTPEVLDLLALTEGEHQLISYEPGYRELSVSSRLDSFLTSDSS HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHEEHHHHHHHHHCCCCC SFQFVEYNAESPAAIAYEDILSQVFEQLPIMQEFQRHYRVESLPARQRLLEAFLAVYREW CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GGTGEPKIAIVDWHGLPTLSEFQLFQQYFAEHGLKTVICAPEDLRYQAGTLYANNTPVNF CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCEEEECCCCHHH VYKRLLTTEFLQRLGNEAFDHPLTQAYRDGAICLANNFRAKLLHKKMIFGLLSDPAITSA HHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHH AGISSATQQQLAQHIPWTRRVTAGRTDYAGTEVDLLDFIRQNRDRLLLKPNDDYGGHGIT HCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEE IGWETEAEAWDLALQQALTEPFVVQERVVIAYEDYPAMVDGQLQIGQRLVDTDPFLFGSE EEECCCHHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEECHH VQGCLTRLSTVTLLNVTAGGGSTTPTFQLSKLS HHHHHHHHHHEEEEEEECCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA