| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901312
Identifier: 159901312
GI number: 159901312
Start: 6118159
End: 6118854
Strand: Reverse
Name: 159901312
Synonym: Haur_4800
Alternate gene names: NA
Gene position: 6118854-6118159 (Counterclockwise)
Preceding gene: 159901313
Following gene: 159901311
Centisome position: 96.41
GC content: 50.43
Gene sequence:
>696_bases ATGGCTGGCCCGTTGGTTTTGCAAGTTGGTGATTGTACCGTTGCTTGTTCGTATGCGTTGCCACATCAGCGTGGCGATGC CTTGCTCCAAACCCGTTTGCGTAGCGTCTTTGCCGACGAAACGCTTGTCCATAACGAAGGCTTAGATGGCGAAGCAACCG AGGATTTTCTCAAGCGCTACGATCGCACGATGGCTCGCTATCCCGAAATCGATCTGATTATTGTGCGTTATGGCGTGAAT GATCGCAAGCGCTACGGCATTGGGCCATTCGAAGCCAAATTGATCGAGCTTTGCGATTTGTTTGAGCGCGATTATCCTCA AGCCAAAATCATCTTGGAAACAGGCATTTACGTCGATTATCCGGCGCATTATGCCTTTGATCGCAACTCCAAGCTAGAGC CAGTGTATCGGATGATTGCCAAACTTGCCCAGCAGCGTGGCTATGCGGTGGTCGATATTTTCGAACGCATGAAGCGTGAA ACCCAACAAGGCAACTGGGATCTACGGGCGCGTGGTTTTGGCTCGGTCGATGAGGATTTTCCGGTGTTGGGGCCAGCGCT TGATCATATTCATGGCCATGATGTACGCTGGTTTACCAACATTCACCCAAATATCCAAGGCATCCAAACGATTGTTGATG AAGAAATCTCCGTAATTACCCAAACCTGGCCAACTGGGTTGCGGGCAATAGCGTGA
Upstream 100 bases:
>100_bases TCATGCTAAAAGTTGTCAAAACTAGGCGAGAACGCTATACTGCCGTATGTGATGTTTGCTGTGGATGCCGCAAATATCAA CGTTTCGGCGGAGGTTCTGG
Downstream 100 bases:
>100_bases GGAGTATTATGCAGCAGGTTCCTTCGACGCATGTGCGTCATCCAATGTGGCCAATTTATCTCTGCGTTGCGGTTACTGCC CTTGGAATTGGGATCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVN DRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRE TQQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA
Sequences:
>Translated_231_residues MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVN DRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRE TQQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA >Mature_230_residues AGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRYDRTMARYPEIDLIIVRYGVND RKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDYPAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRET QQGNWDLRARGFGSVDEDFPVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26425; Mature: 26294
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRY CCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHH DRTMARYPEIDLIIVRYGVNDRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDY HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEC PAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRETQQGNWDLRARGFGSVDEDF CCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure AGPLVLQVGDCTVACSYALPHQRGDALLQTRLRSVFADETLVHNEGLDGEATEDFLKRY CCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHH DRTMARYPEIDLIIVRYGVNDRKRYGIGPFEAKLIELCDLFERDYPQAKIILETGIYVDY HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEC PAHYAFDRNSKLEPVYRMIAKLAQQRGYAVVDIFERMKRETQQGNWDLRARGFGSVDEDF CCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PVLGPALDHIHGHDVRWFTNIHPNIQGIQTIVDEEISVITQTWPTGLRAIA CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA