Click here to switch to the map view.

The map label for this gene is scrK [H]

Identifier: 159901310

GI number: 159901310

Start: 6115603

End: 6116556

Strand: Direct

Name: scrK [H]

Synonym: Haur_4798

Alternate gene names: 159901310

Gene position: 6115603-6116556 (Clockwise)

Preceding gene: 159901309

Following gene: 159901315

Centisome position: 96.36

GC content: 53.25

Gene sequence:

>954_bases
ATGACACAGGCTTTATGTCTCGGTGAATTATTGGTGGATTTTGTGCCAACCGAAGCTGGTTTAGGGGTTGCCAATACACC
GCTCTGGCAACGTGCTGCTGGTGGCGCTCCCGCCAACGTTGCGGTTGGCTTAGCACGCTTGGGCATTACCAGTGGCTTTT
TGGGCATGGTCGGAGCCGATTCGTTTGGCGATTTTTTGGCTGACACATTGGCTCAGCACAATGTCAATATCCAAGGTCTG
CGCCGCACTGAGCAGGCTCGCACAGCCTTGGCATTTGTGGCGCTGCAAGCCGATGGCGAACGCGATTTTATGTTTTATCG
CCATCCCAGCGCTGATATGCTGTTTGCACCAAGCGATCTTGACCCACGCCAATTTGCCAATGTTGAGCTTTTGCATTTTG
GCTCGATCAGCGCCAGCAACGATTTGGGCTACCAAACCACCTTACGTGCAATTGAACTAGCACATGCCAACGGTGCGGTG
CTCTCGTTTGACCCTAATTTGCGGGCAGCGCTTTGGCCCTCGTTGGAAGCAGCGCGGCGGGTGATGCTCAAGCTCTTGCC
ATTAGCCCAAATCGTCAAACTTAGCCGTGAAGAAGCCGAATTTCTGACTGCCCTCGCAGATCCGTTGGCCGCTGCTCAAA
GTTTATGGCATGAACGCAGCCAAGTGATTGTCGTGACTGATGGCAGTGCAGGCTGTTGGTATCAAACTGCTGCTAGATCG
GGCCATGTAGCCGCGCCCAACGTGCAGGCAATTGATGCAACCGGCGCTGGTGATAGCTTTGTGGCCTGCTTATTGGCCCA
ATTAATTCAGCATCCCAGCTTACCCGCTGATCAAACTAAATTTGAGCGGGCCTTACAACGGGCCTGTATTGCCGGAGCCT
TAGCGACTCTTGTGCGTGGTGCAATTCCAGGCTTGCCTACCGCTCAGCAAATTGAGCAATTTCAGCAACAATAA

Upstream 100 bases:

>100_bases
TGAATGAAGGCACACGCCGCCCAACCCTCTATACCTTGCCCGTTAATCTGATCGAACGCGCCAGCAGCAGCAAACTCAGC
CAAGCATAACGGGAGTTGCC

Downstream 100 bases:

>100_bases
AATACCCCATCCGAATAATCGTCGGCATTGCAAGCTTAACAACGCAATAGACGACCAAGCCAAGGAGTTTTTGAGTTGCC
TAAAACCCTGCTGATCTGCC

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTQALCLGELLVDFVPTEAGLGVANTPLWQRAAGGAPANVAVGLARLGITSGFLGMVGADSFGDFLADTLAQHNVNIQGL
RRTEQARTALAFVALQADGERDFMFYRHPSADMLFAPSDLDPRQFANVELLHFGSISASNDLGYQTTLRAIELAHANGAV
LSFDPNLRAALWPSLEAARRVMLKLLPLAQIVKLSREEAEFLTALADPLAAAQSLWHERSQVIVVTDGSAGCWYQTAARS
GHVAAPNVQAIDATGAGDSFVACLLAQLIQHPSLPADQTKFERALQRACIAGALATLVRGAIPGLPTAQQIEQFQQQ

Sequences:

>Translated_317_residues
MTQALCLGELLVDFVPTEAGLGVANTPLWQRAAGGAPANVAVGLARLGITSGFLGMVGADSFGDFLADTLAQHNVNIQGL
RRTEQARTALAFVALQADGERDFMFYRHPSADMLFAPSDLDPRQFANVELLHFGSISASNDLGYQTTLRAIELAHANGAV
LSFDPNLRAALWPSLEAARRVMLKLLPLAQIVKLSREEAEFLTALADPLAAAQSLWHERSQVIVVTDGSAGCWYQTAARS
GHVAAPNVQAIDATGAGDSFVACLLAQLIQHPSLPADQTKFERALQRACIAGALATLVRGAIPGLPTAQQIEQFQQQ
>Mature_316_residues
TQALCLGELLVDFVPTEAGLGVANTPLWQRAAGGAPANVAVGLARLGITSGFLGMVGADSFGDFLADTLAQHNVNIQGLR
RTEQARTALAFVALQADGERDFMFYRHPSADMLFAPSDLDPRQFANVELLHFGSISASNDLGYQTTLRAIELAHANGAVL
SFDPNLRAALWPSLEAARRVMLKLLPLAQIVKLSREEAEFLTALADPLAAAQSLWHERSQVIVVTDGSAGCWYQTAARSG
HVAAPNVQAIDATGAGDSFVACLLAQLIQHPSLPADQTKFERALQRACIAGALATLVRGAIPGLPTAQQIEQFQQQ

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=286, Percent_Identity=28.6713286713287, Blast_Score=89, Evalue=6e-18,
Organism=Escherichia coli, GI1790193, Length=293, Percent_Identity=26.2798634812287, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081971, Length=325, Percent_Identity=26.1538461538462, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87082281, Length=310, Percent_Identity=25.8064516129032, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87082343, Length=324, Percent_Identity=27.4691358024691, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17532905, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI20128807, Length=327, Percent_Identity=25.3822629969419, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 33735; Mature: 33604

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQALCLGELLVDFVPTEAGLGVANTPLWQRAAGGAPANVAVGLARLGITSGFLGMVGAD
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SFGDFLADTLAQHNVNIQGLRRTEQARTALAFVALQADGERDFMFYRHPSADMLFAPSDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCEEECCCCC
DPRQFANVELLHFGSISASNDLGYQTTLRAIELAHANGAVLSFDPNLRAALWPSLEAARR
CHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCHHHHHH
VMLKLLPLAQIVKLSREEAEFLTALADPLAAAQSLWHERSQVIVVTDGSAGCWYQTAARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHCCC
GHVAAPNVQAIDATGAGDSFVACLLAQLIQHPSLPADQTKFERALQRACIAGALATLVRG
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIPGLPTAQQIEQFQQQ
CCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TQALCLGELLVDFVPTEAGLGVANTPLWQRAAGGAPANVAVGLARLGITSGFLGMVGAD
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SFGDFLADTLAQHNVNIQGLRRTEQARTALAFVALQADGERDFMFYRHPSADMLFAPSDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCEEECCCCC
DPRQFANVELLHFGSISASNDLGYQTTLRAIELAHANGAVLSFDPNLRAALWPSLEAARR
CHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCHHHHHH
VMLKLLPLAQIVKLSREEAEFLTALADPLAAAQSLWHERSQVIVVTDGSAGCWYQTAARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHCCC
GHVAAPNVQAIDATGAGDSFVACLLAQLIQHPSLPADQTKFERALQRACIAGALATLVRG
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIPGLPTAQQIEQFQQQ
CCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809835 [H]