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The map label for this gene is ccpA [H]

Identifier: 159901309

GI number: 159901309

Start: 6114581

End: 6115591

Strand: Direct

Name: ccpA [H]

Synonym: Haur_4797

Alternate gene names: 159901309

Gene position: 6114581-6115591 (Clockwise)

Preceding gene: 159901308

Following gene: 159901310

Centisome position: 96.34

GC content: 52.23

Gene sequence:

>1011_bases
ATGGCATATACGATTAAAGATGTGGCGAAACGGGCGGGAGTTGGCATTGCAACCGTTTCGCGGGTGCTCAACGAATCGCC
CAACGTGCTACCAGAAACTCGTGCCAGAGTTTTGGCAGTGATCGACGAGCTTGGTTATCGACCAAATCATGCTGCTCGCC
AACTGGTAACCGCCAAAACCAATGCGATTGCGATTATTCTGCCCTTCCTTACGCGACCATTTTTTATTGAAGTGCTGCGG
GGCATCGAAGCGGTTGTGGCCAATTCTGAATATCAGTTGATTATTTTTAATGTTGACTCGCCGGAACAACGCACGCGCTA
TTTTAATACGCTGCCATTTTTGGGGCGTACCGATGGGCTGTTGATTGTTTCGTTGCCTTTGGCTCAGCCTGAAATCAAAC
GCTTGCAAGCGGCCAATTTGCCAGCAGTGATGATCGACACTCAAGTTGCCAATTTACCATCAGTGGTCGTTGATAATGTG
GGCGGTGCATTCAAAGCCGTCGAACATCTAATCAGCCAAGGCCATCAGCGGATTGGCTTTGTTTCGGGTCAGTTGGAACC
AGATTTGGGTTTTACCGTCAACCGCGATCGGCGGCGAGGCTACGAGGCTGCTCTCACTGCGCATCATCTGCCATTGCAAC
CTGAATATCTGCGGCCAGGCTTTGATCGGCGCGATTGGGGCCATCAGGCGGCGCTTGAATTGCTGGCATTACCTGAGTCA
CCGAGCGCTATTTTTGCTGCCAACGACGATTTAGCCTTTGGCGTGATCGATGCTTTGCGCGAACGCGGCTTGAAGGCAGG
CGAAGACATCGCCGTGGTTGGCTATGATGATCTCGAAATGGCGCAGTTGGTGGGTTTAACCACAATTCATCAGCCAATGG
AGCAAATGGGCCGTAAGGGAGCTGAGGTTTTGCTGGCCGCGCTGAATGAAGGCACACGCCGCCCAACCCTCTATACCTTG
CCCGTTAATCTGATCGAACGCGCCAGCAGCAGCAAACTCAGCCAAGCATAA

Upstream 100 bases:

>100_bases
GGCCTATGGTATGATTTTTCGCACACGCTTGACAAGCTGGCTATACTCAGGATAAGATGCTCTGGAAGCGTTTCCATGGC
TCATTGGAGAGTACAAACCC

Downstream 100 bases:

>100_bases
CGGGAGTTGCCATGACACAGGCTTTATGTCTCGGTGAATTATTGGTGGATTTTGTGCCAACCGAAGCTGGTTTAGGGGTT
GCCAATACACCGCTCTGGCA

Product: LacI family transcription regulator

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MAYTIKDVAKRAGVGIATVSRVLNESPNVLPETRARVLAVIDELGYRPNHAARQLVTAKTNAIAIILPFLTRPFFIEVLR
GIEAVVANSEYQLIIFNVDSPEQRTRYFNTLPFLGRTDGLLIVSLPLAQPEIKRLQAANLPAVMIDTQVANLPSVVVDNV
GGAFKAVEHLISQGHQRIGFVSGQLEPDLGFTVNRDRRRGYEAALTAHHLPLQPEYLRPGFDRRDWGHQAALELLALPES
PSAIFAANDDLAFGVIDALRERGLKAGEDIAVVGYDDLEMAQLVGLTTIHQPMEQMGRKGAEVLLAALNEGTRRPTLYTL
PVNLIERASSSKLSQA

Sequences:

>Translated_336_residues
MAYTIKDVAKRAGVGIATVSRVLNESPNVLPETRARVLAVIDELGYRPNHAARQLVTAKTNAIAIILPFLTRPFFIEVLR
GIEAVVANSEYQLIIFNVDSPEQRTRYFNTLPFLGRTDGLLIVSLPLAQPEIKRLQAANLPAVMIDTQVANLPSVVVDNV
GGAFKAVEHLISQGHQRIGFVSGQLEPDLGFTVNRDRRRGYEAALTAHHLPLQPEYLRPGFDRRDWGHQAALELLALPES
PSAIFAANDDLAFGVIDALRERGLKAGEDIAVVGYDDLEMAQLVGLTTIHQPMEQMGRKGAEVLLAALNEGTRRPTLYTL
PVNLIERASSSKLSQA
>Mature_335_residues
AYTIKDVAKRAGVGIATVSRVLNESPNVLPETRARVLAVIDELGYRPNHAARQLVTAKTNAIAIILPFLTRPFFIEVLRG
IEAVVANSEYQLIIFNVDSPEQRTRYFNTLPFLGRTDGLLIVSLPLAQPEIKRLQAANLPAVMIDTQVANLPSVVVDNVG
GAFKAVEHLISQGHQRIGFVSGQLEPDLGFTVNRDRRRGYEAALTAHHLPLQPEYLRPGFDRRDWGHQAALELLALPESP
SAIFAANDDLAFGVIDALRERGLKAGEDIAVVGYDDLEMAQLVGLTTIHQPMEQMGRKGAEVLLAALNEGTRRPTLYTLP
VNLIERASSSKLSQA

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=312, Percent_Identity=35.5769230769231, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1790194, Length=334, Percent_Identity=36.2275449101796, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1787948, Length=332, Percent_Identity=31.3253012048193, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788474, Length=309, Percent_Identity=29.7734627831715, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1787580, Length=315, Percent_Identity=30.4761904761905, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786540, Length=336, Percent_Identity=30.6547619047619, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1789202, Length=303, Percent_Identity=29.3729372937294, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI48994940, Length=330, Percent_Identity=30.6060606060606, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789068, Length=340, Percent_Identity=30.2941176470588, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789456, Length=341, Percent_Identity=27.5659824046921, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790715, Length=313, Percent_Identity=27.7955271565495, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787906, Length=269, Percent_Identity=29.368029739777, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790689, Length=332, Percent_Identity=26.5060240963855, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786268, Length=338, Percent_Identity=24.2603550295858, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790192, Length=281, Percent_Identity=26.6903914590747, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36807; Mature: 36676

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTIKDVAKRAGVGIATVSRVLNESPNVLPETRARVLAVIDELGYRPNHAARQLVTAKT
CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NAIAIILPFLTRPFFIEVLRGIEAVVANSEYQLIIFNVDSPEQRTRYFNTLPFLGRTDGL
CEEEEEEHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
LIVSLPLAQPEIKRLQAANLPAVMIDTQVANLPSVVVDNVGGAFKAVEHLISQGHQRIGF
EEEEECCCCHHHHHHHHCCCCEEEEECHHHCCCHHHHHCCCHHHHHHHHHHHCCCCEEEE
VSGQLEPDLGFTVNRDRRRGYEAALTAHHLPLQPEYLRPGFDRRDWGHQAALELLALPES
ECCCCCCCCCCEECCHHHCCHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCC
PSAIFAANDDLAFGVIDALRERGLKAGEDIAVVGYDDLEMAQLVGLTTIHQPMEQMGRKG
CCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
AEVLLAALNEGTRRPTLYTLPVNLIERASSSKLSQA
HHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AYTIKDVAKRAGVGIATVSRVLNESPNVLPETRARVLAVIDELGYRPNHAARQLVTAKT
CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NAIAIILPFLTRPFFIEVLRGIEAVVANSEYQLIIFNVDSPEQRTRYFNTLPFLGRTDGL
CEEEEEEHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
LIVSLPLAQPEIKRLQAANLPAVMIDTQVANLPSVVVDNVGGAFKAVEHLISQGHQRIGF
EEEEECCCCHHHHHHHHCCCCEEEEECHHHCCCHHHHHCCCHHHHHHHHHHHCCCCEEEE
VSGQLEPDLGFTVNRDRRRGYEAALTAHHLPLQPEYLRPGFDRRDWGHQAALELLALPES
ECCCCCCCCCCEECCHHHCCHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCC
PSAIFAANDDLAFGVIDALRERGLKAGEDIAVVGYDDLEMAQLVGLTTIHQPMEQMGRKG
CCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
AEVLLAALNEGTRRPTLYTLPVNLIERASSSKLSQA
HHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]