Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901295

Identifier: 159901295

GI number: 159901295

Start: 6099548

End: 6100129

Strand: Reverse

Name: 159901295

Synonym: Haur_4783

Alternate gene names: NA

Gene position: 6100129-6099548 (Counterclockwise)

Preceding gene: 159901307

Following gene: 159901294

Centisome position: 96.12

GC content: 50.34

Gene sequence:

>582_bases
ATGTTTTCGCAACGAACCAATAGCCCACCCCCGGCCCTGATTGGGGTGATTATTGGGCTAGTGTTAATTTTTTTGGTTTC
AACTCGTTCTTGTAACCCTGATAGTGAGCAGACGCTCCGCAGCCGTTTTGCCGAAGCTAACGCTACTCAAGTGGCCAGCC
AGAATCTTGGTACACCCCTGATTCCATTACCAGCCCCAGTGCAGGAATGGAGTTCAACCGCGATTGCACGACTGCAAGGC
GGCGAGGCGGTAGTGCCAATTACGCCCGTTGTTACCAACGATAAGCTCAAAGTCGATATTCAATCGCTTCAACAAGTGGG
CGAGGGCTTACAAATTAAAGGTGTCGTTACCAATATTAGCAGCAAAGAATTACGCGTACCATTGGCAGCCTTCCGCTTTA
CCGACCAATCGGGCACCGTCTATGCTGCTCAAGGCGATGCAGCGGCGAATTTGCCGCCCAACGCCAACACAACGCTTGAT
CTCACGTTGCCGATCAAGAATCCAACCGCATTAACCATGGTTGTCGAAATTCCTGCCGAGGAGATTCGGCTGGAAGTTAA
TTTACTTGCGCAACAACAATAA

Upstream 100 bases:

>100_bases
AAACATGGATTTTTGTCCTATGATTGGGGTATTACCTGGATGATTATGTTTGGCTAAAAGCGCGGTACAATACTCGTTAC
GATTGTGCTGGAGGTTGATG

Downstream 100 bases:

>100_bases
GTTTAAGGAGTTTTCATGACCCGTCAAAAGGGACGTGGTGCGCGTGAACAGAATCGGGCTGATCGGCGCAACGAATATGC
AACCCTAGTTGCTCCACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG
GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD
LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ

Sequences:

>Translated_193_residues
MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG
GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD
LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ
>Mature_193_residues
MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPLIPLPAPVQEWSSTAIARLQG
GEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNISSKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLD
LTLPIKNPTALTMVVEIPAEEIRLEVNLLAQQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20559; Mature: 20559

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC
IPLPAPVQEWSSTAIARLQGGEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNIS
CCCCCCHHHHCCHHEEEECCCCEEEEEECEEECCEEEEEHHHHHHHCCCEEEEEEEECCC
SKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLDLTLPIKNPTALTMVVEIPAE
CCCEECEEEHEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHH
EIRLEVNLLAQQQ
HEEEEEEEEECCC
>Mature Secondary Structure
MFSQRTNSPPPALIGVIIGLVLIFLVSTRSCNPDSEQTLRSRFAEANATQVASQNLGTPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC
IPLPAPVQEWSSTAIARLQGGEAVVPITPVVTNDKLKVDIQSLQQVGEGLQIKGVVTNIS
CCCCCCHHHHCCHHEEEECCCCEEEEEECEEECCEEEEEHHHHHHHCCCEEEEEEEECCC
SKELRVPLAAFRFTDQSGTVYAAQGDAAANLPPNANTTLDLTLPIKNPTALTMVVEIPAE
CCCEECEEEHEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHH
EIRLEVNLLAQQQ
HEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA